Gene : Phvul.001G031000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31602:SF2 - GROWTH-REGULATING FACTOR 1-RELATED Genomic Order:  312
Name:  ? Phvul.001G031000 Secondary Identifier:  ? PAC:37169263
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G031000 0.5kb upstream 0.5kb upstream 5040 true Chr01: 2747440-2752479 Phaseolus vulgaris
Phvul.001G031000 0.5kb upstream 0.5kb upstream 500 false Chr01: 2751980-2752479 Phaseolus vulgaris
Phvul.001G031000 0.5kb downstream 0.5kb downstream 5040 true Chr01: 2746940-2751979 Phaseolus vulgaris
Phvul.001G031000 0.5kb downstream 0.5kb downstream 500 false Chr01: 2746940-2747439 Phaseolus vulgaris
Phvul.001G031000 1.0kb upstream 1.0kb upstream 5540 true Chr01: 2747440-2752979 Phaseolus vulgaris
Phvul.001G031000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2751980-2752979 Phaseolus vulgaris
Phvul.001G031000 1.0kb downstream 1.0kb downstream 5540 true Chr01: 2746440-2751979 Phaseolus vulgaris
Phvul.001G031000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2746440-2747439 Phaseolus vulgaris
Phvul.001G031000 2.0kb upstream 2.0kb upstream 6540 true Chr01: 2747440-2753979 Phaseolus vulgaris
Phvul.001G031000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2751980-2753979 Phaseolus vulgaris
Phvul.001G031000 2.0kb downstream 2.0kb downstream 6540 true Chr01: 2745440-2751979 Phaseolus vulgaris
Phvul.001G031000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2745440-2747439 Phaseolus vulgaris
Phvul.001G031000 5.0kb upstream 5.0kb upstream 9540 true Chr01: 2747440-2756979 Phaseolus vulgaris
Phvul.001G031000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2751980-2756979 Phaseolus vulgaris
Phvul.001G031000 5.0kb downstream 5.0kb downstream 9540 true Chr01: 2742440-2751979 Phaseolus vulgaris
Phvul.001G031000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2742440-2747439 Phaseolus vulgaris
Phvul.001G031000 10.0kb upstream 10.0kb upstream 14540 true Chr01: 2747440-2761979 Phaseolus vulgaris
Phvul.001G031000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2751980-2761979 Phaseolus vulgaris
Phvul.001G031000 10.0kb downstream 10.0kb downstream 14540 true Chr01: 2737440-2751979 Phaseolus vulgaris
Phvul.001G031000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2737440-2747439 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305476 5265 Fabidae View MSA
124070483 5270 Rosid View MSA
123751333 5271 Pentapetalae View MSA
122792391 5272 Eudicot View MSA
122044407 5273 Angiosperm View MSA
121349095 5274 Embryophyte View MSA
123381164 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.0917 0.0 19.1711    
cufflinks 16.5566 0.0 42.8247    
cufflinks 20.4447 0.0 52.8718    
cufflinks 2.1093 0.0 6.42391   Low
cufflinks 17.2651 0.0 44.6513    
cufflinks 41.4329 0.0 110.35 High High
cufflinks 7.59972 0.0 20.298    
cufflinks 3.99954 0.0 11.3147    
cufflinks 16.4466 0.0 42.5196    
cufflinks 0.542234 0.0 1.92779   Low
cufflinks 22.777 0.0 58.9526    

0 Strain