Gene : Phvul.001G030600 P. vulgaris v2.1
Defline:  (1 of 2) K02946 - small subunit ribosomal protein S10 (RP-S10, MRPS10, rpsJ) Genomic Order:  308
Name:  ? Phvul.001G030600 Secondary Identifier:  ? PAC:37169315
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G030600 0.5kb upstream 0.5kb upstream 4880 true Chr01: 2715853-2720732 Phaseolus vulgaris
Phvul.001G030600 0.5kb upstream 0.5kb upstream 500 false Chr01: 2715853-2716352 Phaseolus vulgaris
Phvul.001G030600 0.5kb downstream 0.5kb downstream 4880 true Chr01: 2716353-2721232 Phaseolus vulgaris
Phvul.001G030600 0.5kb downstream 0.5kb downstream 500 false Chr01: 2720733-2721232 Phaseolus vulgaris
Phvul.001G030600 1.0kb upstream 1.0kb upstream 5380 true Chr01: 2715353-2720732 Phaseolus vulgaris
Phvul.001G030600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2715353-2716352 Phaseolus vulgaris
Phvul.001G030600 1.0kb downstream 1.0kb downstream 5380 true Chr01: 2716353-2721732 Phaseolus vulgaris
Phvul.001G030600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2720733-2721732 Phaseolus vulgaris
Phvul.001G030600 2.0kb upstream 2.0kb upstream 6380 true Chr01: 2714353-2720732 Phaseolus vulgaris
Phvul.001G030600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2714353-2716352 Phaseolus vulgaris
Phvul.001G030600 2.0kb downstream 2.0kb downstream 6380 true Chr01: 2716353-2722732 Phaseolus vulgaris
Phvul.001G030600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2720733-2722732 Phaseolus vulgaris
Phvul.001G030600 5.0kb upstream 5.0kb upstream 9380 true Chr01: 2711353-2720732 Phaseolus vulgaris
Phvul.001G030600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2711353-2716352 Phaseolus vulgaris
Phvul.001G030600 5.0kb downstream 5.0kb downstream 9380 true Chr01: 2716353-2725732 Phaseolus vulgaris
Phvul.001G030600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2720733-2725732 Phaseolus vulgaris
Phvul.001G030600 10.0kb upstream 10.0kb upstream 14380 true Chr01: 2706353-2720732 Phaseolus vulgaris
Phvul.001G030600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2706353-2716352 Phaseolus vulgaris
Phvul.001G030600 10.0kb downstream 10.0kb downstream 14380 true Chr01: 2716353-2730732 Phaseolus vulgaris
Phvul.001G030600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2720733-2730732 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026497 5273 Angiosperm View MSA
122306608 5265 Fabidae View MSA
124068584 5270 Rosid View MSA
123745585 5271 Pentapetalae View MSA
122786929 5272 Eudicot View MSA
121343916 5274 Embryophyte View MSA
123426498 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.5355 0.0 80.1027    
cufflinks 37.332 0.0 97.1166 High  
cufflinks 129.311 0.0 346.551 High High
cufflinks 37.2034 0.0 96.8367 High  
cufflinks 20.3261 0.0 54.9902    
cufflinks 80.7189 0.0 210.136 High High
cufflinks 4.32137 0.0 13.713   Low
cufflinks 10.1357 0.0 29.1943    
cufflinks 4.61245 0.0 14.5479   Low
cufflinks 12.8248 0.0 36.0828    
cufflinks 14.1488 0.0 39.5899    

0 Strain