Gene : Phvul.001G031200 P. vulgaris v2.1
Defline:  (1 of 17) K09285 - AP2-like factor, ANT lineage (OVM, ANT) Genomic Order:  314
Name:  ? Phvul.001G031200 Secondary Identifier:  ? PAC:37169514
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G031200 0.5kb upstream 0.5kb upstream 5013 true Chr01: 2806115-2811127 Phaseolus vulgaris
Phvul.001G031200 0.5kb upstream 0.5kb upstream 500 false Chr01: 2806115-2806614 Phaseolus vulgaris
Phvul.001G031200 0.5kb downstream 0.5kb downstream 5013 true Chr01: 2806615-2811627 Phaseolus vulgaris
Phvul.001G031200 0.5kb downstream 0.5kb downstream 500 false Chr01: 2811128-2811627 Phaseolus vulgaris
Phvul.001G031200 1.0kb upstream 1.0kb upstream 5513 true Chr01: 2805615-2811127 Phaseolus vulgaris
Phvul.001G031200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2805615-2806614 Phaseolus vulgaris
Phvul.001G031200 1.0kb downstream 1.0kb downstream 5513 true Chr01: 2806615-2812127 Phaseolus vulgaris
Phvul.001G031200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2811128-2812127 Phaseolus vulgaris
Phvul.001G031200 2.0kb upstream 2.0kb upstream 6513 true Chr01: 2804615-2811127 Phaseolus vulgaris
Phvul.001G031200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2804615-2806614 Phaseolus vulgaris
Phvul.001G031200 2.0kb downstream 2.0kb downstream 6513 true Chr01: 2806615-2813127 Phaseolus vulgaris
Phvul.001G031200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2811128-2813127 Phaseolus vulgaris
Phvul.001G031200 5.0kb upstream 5.0kb upstream 9513 true Chr01: 2801615-2811127 Phaseolus vulgaris
Phvul.001G031200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2801615-2806614 Phaseolus vulgaris
Phvul.001G031200 5.0kb downstream 5.0kb downstream 9513 true Chr01: 2806615-2816127 Phaseolus vulgaris
Phvul.001G031200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2811128-2816127 Phaseolus vulgaris
Phvul.001G031200 10.0kb upstream 10.0kb upstream 14513 true Chr01: 2796615-2811127 Phaseolus vulgaris
Phvul.001G031200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2796615-2806614 Phaseolus vulgaris
Phvul.001G031200 10.0kb downstream 10.0kb downstream 14513 true Chr01: 2806615-2821127 Phaseolus vulgaris
Phvul.001G031200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2811128-2821127 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300220 5265 Fabidae View MSA
124069509 5270 Rosid View MSA
123749531 5271 Pentapetalae View MSA
122794764 5272 Eudicot View MSA
122048323 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.286275 0.0 1.03373 Low Low
cufflinks 1.40304 0.0 4.24601    
cufflinks 0.290805 0.0 1.04519 Low Low
cufflinks 0.0681164 0.0 0.277974 Low Low
cufflinks 8.16812 0.0 21.3021    
cufflinks 2.53183 0.0 7.17064    
cufflinks 13.4489 0.0 34.8134   High
cufflinks 8.14625 0.0 21.1441    
cufflinks 2.93909 0.0 8.19538    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.16093 0.0 23.7675    

0 Strain