Gene : Phvul.001G015400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR35464:SF1 - F18O14.9 Genomic Order:  154
Name:  ? Phvul.001G015400 Secondary Identifier:  ? PAC:37168343
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G015400 0.5kb upstream 0.5kb upstream 2790 true Chr01: 1182093-1184882 Phaseolus vulgaris
Phvul.001G015400 0.5kb upstream 0.5kb upstream 500 false Chr01: 1182093-1182592 Phaseolus vulgaris
Phvul.001G015400 0.5kb downstream 0.5kb downstream 2790 true Chr01: 1182593-1185382 Phaseolus vulgaris
Phvul.001G015400 0.5kb downstream 0.5kb downstream 500 false Chr01: 1184883-1185382 Phaseolus vulgaris
Phvul.001G015400 1.0kb upstream 1.0kb upstream 3290 true Chr01: 1181593-1184882 Phaseolus vulgaris
Phvul.001G015400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1181593-1182592 Phaseolus vulgaris
Phvul.001G015400 1.0kb downstream 1.0kb downstream 3290 true Chr01: 1182593-1185882 Phaseolus vulgaris
Phvul.001G015400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1184883-1185882 Phaseolus vulgaris
Phvul.001G015400 2.0kb upstream 2.0kb upstream 4290 true Chr01: 1180593-1184882 Phaseolus vulgaris
Phvul.001G015400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1180593-1182592 Phaseolus vulgaris
Phvul.001G015400 2.0kb downstream 2.0kb downstream 4290 true Chr01: 1182593-1186882 Phaseolus vulgaris
Phvul.001G015400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1184883-1186882 Phaseolus vulgaris
Phvul.001G015400 5.0kb upstream 5.0kb upstream 7290 true Chr01: 1177593-1184882 Phaseolus vulgaris
Phvul.001G015400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1177593-1182592 Phaseolus vulgaris
Phvul.001G015400 5.0kb downstream 5.0kb downstream 7290 true Chr01: 1182593-1189882 Phaseolus vulgaris
Phvul.001G015400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1184883-1189882 Phaseolus vulgaris
Phvul.001G015400 10.0kb upstream 10.0kb upstream 12290 true Chr01: 1172593-1184882 Phaseolus vulgaris
Phvul.001G015400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1172593-1182592 Phaseolus vulgaris
Phvul.001G015400 10.0kb downstream 10.0kb downstream 12290 true Chr01: 1182593-1194882 Phaseolus vulgaris
Phvul.001G015400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1184883-1194882 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303648 5265 Fabidae View MSA
124062164 5270 Rosid View MSA
123740083 5271 Pentapetalae View MSA
122790086 5272 Eudicot View MSA
122043322 5273 Angiosperm View MSA
121347201 5274 Embryophyte View MSA
123427704 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.64939 0.0 25.3486    
cufflinks 14.6435 0.0 37.925   High
cufflinks 8.78477 0.0 23.2088    
cufflinks 19.5141 0.0 50.4407   High
cufflinks 11.0113 0.0 28.8343    
cufflinks 8.55618 0.0 22.6784    
cufflinks 6.51724 0.0 17.6219   Low
cufflinks 4.84069 0.0 13.41   Low
cufflinks 9.93915 0.0 26.1537    
cufflinks 12.1004 0.0 31.5175    
cufflinks 11.9248 0.0 31.104    

0 Strain