Gene : Phvul.001G017500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21569:SF2 - 30S RIBOSOMAL PROTEIN S9, CHLOROPLASTIC Genomic Order:  177
Name:  ? Phvul.001G017500 Secondary Identifier:  ? PAC:37170218
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G017500 0.5kb upstream 0.5kb upstream 4006 true Chr01: 1358249-1362254 Phaseolus vulgaris
Phvul.001G017500 0.5kb upstream 0.5kb upstream 500 false Chr01: 1358249-1358748 Phaseolus vulgaris
Phvul.001G017500 0.5kb downstream 0.5kb downstream 4006 true Chr01: 1358749-1362754 Phaseolus vulgaris
Phvul.001G017500 0.5kb downstream 0.5kb downstream 500 false Chr01: 1362255-1362754 Phaseolus vulgaris
Phvul.001G017500 1.0kb upstream 1.0kb upstream 4506 true Chr01: 1357749-1362254 Phaseolus vulgaris
Phvul.001G017500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1357749-1358748 Phaseolus vulgaris
Phvul.001G017500 1.0kb downstream 1.0kb downstream 4506 true Chr01: 1358749-1363254 Phaseolus vulgaris
Phvul.001G017500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1362255-1363254 Phaseolus vulgaris
Phvul.001G017500 2.0kb upstream 2.0kb upstream 5506 true Chr01: 1356749-1362254 Phaseolus vulgaris
Phvul.001G017500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1356749-1358748 Phaseolus vulgaris
Phvul.001G017500 2.0kb downstream 2.0kb downstream 5506 true Chr01: 1358749-1364254 Phaseolus vulgaris
Phvul.001G017500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1362255-1364254 Phaseolus vulgaris
Phvul.001G017500 5.0kb upstream 5.0kb upstream 8506 true Chr01: 1353749-1362254 Phaseolus vulgaris
Phvul.001G017500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1353749-1358748 Phaseolus vulgaris
Phvul.001G017500 5.0kb downstream 5.0kb downstream 8506 true Chr01: 1358749-1367254 Phaseolus vulgaris
Phvul.001G017500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1362255-1367254 Phaseolus vulgaris
Phvul.001G017500 10.0kb upstream 10.0kb upstream 13506 true Chr01: 1348749-1362254 Phaseolus vulgaris
Phvul.001G017500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1348749-1358748 Phaseolus vulgaris
Phvul.001G017500 10.0kb downstream 10.0kb downstream 13506 true Chr01: 1358749-1372254 Phaseolus vulgaris
Phvul.001G017500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1362255-1372254 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304774 5265 Fabidae View MSA
124063747 5270 Rosid View MSA
123737620 5271 Pentapetalae View MSA
122790532 5272 Eudicot View MSA
122043582 5273 Angiosperm View MSA
121345989 5274 Embryophyte View MSA
123426879 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 82.2408 0.0 215.079 High  
cufflinks 139.086 0.0 377.01 High  
cufflinks 399.878 0.0 1239.02 High High
cufflinks 113.27 0.0 301.923 High  
cufflinks 78.5037 0.0 204.662 High  
cufflinks 311.672 0.0 926.824 High High
cufflinks 12.5154 0.0 34.9708   Low
cufflinks 15.3162 0.0 41.9967   Low
cufflinks 15.2624 0.0 42.0697   Low
cufflinks 64.0395 0.0 165.94 High  
cufflinks 63.6651 0.0 164.987 High  

0 Strain