Gene : Phvul.001G017300 P. vulgaris v2.1
Defline:  (1 of 7) PF00646//PF07723//PF08387 - F-box domain (F-box) // Leucine Rich Repeat (LRR_2) // FBD (FBD) Genomic Order:  175
Name:  ? Phvul.001G017300 Secondary Identifier:  ? PAC:37168475
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G017300 0.5kb upstream 0.5kb upstream 3762 true Chr01: 1340311-1344072 Phaseolus vulgaris
Phvul.001G017300 0.5kb upstream 0.5kb upstream 500 false Chr01: 1340311-1340810 Phaseolus vulgaris
Phvul.001G017300 0.5kb downstream 0.5kb downstream 3762 true Chr01: 1340811-1344572 Phaseolus vulgaris
Phvul.001G017300 0.5kb downstream 0.5kb downstream 500 false Chr01: 1344073-1344572 Phaseolus vulgaris
Phvul.001G017300 1.0kb upstream 1.0kb upstream 4262 true Chr01: 1339811-1344072 Phaseolus vulgaris
Phvul.001G017300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1339811-1340810 Phaseolus vulgaris
Phvul.001G017300 1.0kb downstream 1.0kb downstream 4262 true Chr01: 1340811-1345072 Phaseolus vulgaris
Phvul.001G017300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1344073-1345072 Phaseolus vulgaris
Phvul.001G017300 2.0kb upstream 2.0kb upstream 5262 true Chr01: 1338811-1344072 Phaseolus vulgaris
Phvul.001G017300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1338811-1340810 Phaseolus vulgaris
Phvul.001G017300 2.0kb downstream 2.0kb downstream 5262 true Chr01: 1340811-1346072 Phaseolus vulgaris
Phvul.001G017300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1344073-1346072 Phaseolus vulgaris
Phvul.001G017300 5.0kb upstream 5.0kb upstream 8262 true Chr01: 1335811-1344072 Phaseolus vulgaris
Phvul.001G017300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1335811-1340810 Phaseolus vulgaris
Phvul.001G017300 5.0kb downstream 5.0kb downstream 8262 true Chr01: 1340811-1349072 Phaseolus vulgaris
Phvul.001G017300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1344073-1349072 Phaseolus vulgaris
Phvul.001G017300 10.0kb upstream 10.0kb upstream 13262 true Chr01: 1330811-1344072 Phaseolus vulgaris
Phvul.001G017300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1330811-1340810 Phaseolus vulgaris
Phvul.001G017300 10.0kb downstream 10.0kb downstream 13262 true Chr01: 1340811-1354072 Phaseolus vulgaris
Phvul.001G017300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1344073-1354072 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304842 5265 Fabidae View MSA
124071002 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.80062 0.0 11.5622    
cufflinks 4.91988 0.0 14.5559   High
cufflinks 4.20939 0.0 12.6422    
cufflinks 4.80298 0.0 14.3367   High
cufflinks 2.50165 0.0 8.05058   Low
cufflinks 4.81389 0.0 14.2883   High
cufflinks 2.56602 0.0 8.20467   Low
cufflinks 4.23893 0.0 12.7167    
cufflinks 2.41141 0.0 7.78996   Low
cufflinks 2.5748 0.0 8.20682   Low
cufflinks 3.02579 0.0 9.53152    

0 Strain