Gene : Phvul.001G017700 P. vulgaris v2.1
Defline:  (1 of 1) PF09763 - Exocyst complex component Sec3 (Sec3_C) Genomic Order:  179
Name:  ? Phvul.001G017700 Secondary Identifier:  ? PAC:37168390
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G017700 0.5kb upstream 0.5kb upstream 16868 true Chr01: 1379071-1395938 Phaseolus vulgaris
Phvul.001G017700 0.5kb upstream 0.5kb upstream 500 false Chr01: 1379071-1379570 Phaseolus vulgaris
Phvul.001G017700 0.5kb downstream 0.5kb downstream 16868 true Chr01: 1379571-1396438 Phaseolus vulgaris
Phvul.001G017700 0.5kb downstream 0.5kb downstream 500 false Chr01: 1395939-1396438 Phaseolus vulgaris
Phvul.001G017700 1.0kb upstream 1.0kb upstream 17368 true Chr01: 1378571-1395938 Phaseolus vulgaris
Phvul.001G017700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1378571-1379570 Phaseolus vulgaris
Phvul.001G017700 1.0kb downstream 1.0kb downstream 17368 true Chr01: 1379571-1396938 Phaseolus vulgaris
Phvul.001G017700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1395939-1396938 Phaseolus vulgaris
Phvul.001G017700 2.0kb upstream 2.0kb upstream 18368 true Chr01: 1377571-1395938 Phaseolus vulgaris
Phvul.001G017700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1377571-1379570 Phaseolus vulgaris
Phvul.001G017700 2.0kb downstream 2.0kb downstream 18368 true Chr01: 1379571-1397938 Phaseolus vulgaris
Phvul.001G017700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1395939-1397938 Phaseolus vulgaris
Phvul.001G017700 5.0kb upstream 5.0kb upstream 21368 true Chr01: 1374571-1395938 Phaseolus vulgaris
Phvul.001G017700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1374571-1379570 Phaseolus vulgaris
Phvul.001G017700 5.0kb downstream 5.0kb downstream 21368 true Chr01: 1379571-1400938 Phaseolus vulgaris
Phvul.001G017700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1395939-1400938 Phaseolus vulgaris
Phvul.001G017700 10.0kb upstream 10.0kb upstream 26368 true Chr01: 1369571-1395938 Phaseolus vulgaris
Phvul.001G017700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1369571-1379570 Phaseolus vulgaris
Phvul.001G017700 10.0kb downstream 10.0kb downstream 26368 true Chr01: 1379571-1405938 Phaseolus vulgaris
Phvul.001G017700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1395939-1405938 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305071 5265 Fabidae View MSA
124062272 5270 Rosid View MSA
123744034 5271 Pentapetalae View MSA
122788203 5272 Eudicot View MSA
122043094 5273 Angiosperm View MSA
121346884 5274 Embryophyte View MSA
123428518 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.4014 0.0 21.7906   Low
cufflinks 16.609 0.0 46.4252    
cufflinks 18.5433 0.0 52.0324    
cufflinks 13.3879 0.0 42.7815    
cufflinks 13.6116 0.0 43.506    
cufflinks 19.4334 0.0 54.5585   High
cufflinks 12.6513 0.0 40.33    
cufflinks 15.1521 0.0 48.1072    
cufflinks 14.4205 0.0 40.2525    
cufflinks 20.935 0.0 67.6104   High
cufflinks 14.3793 0.0 40.0023    

0 Strain