Gene : Phvul.001G016500 P. vulgaris v2.1
Defline:  (1 of 2) 3.4.24.36 - Leishmanolysin / Promastigote surface endopeptidase Genomic Order:  167
Name:  ? Phvul.001G016500 Secondary Identifier:  ? PAC:37168733
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G016500 0.5kb upstream 0.5kb upstream 9804 true Chr01: 1275780-1285583 Phaseolus vulgaris
Phvul.001G016500 0.5kb upstream 0.5kb upstream 500 false Chr01: 1275780-1276279 Phaseolus vulgaris
Phvul.001G016500 0.5kb downstream 0.5kb downstream 9804 true Chr01: 1276280-1286083 Phaseolus vulgaris
Phvul.001G016500 0.5kb downstream 0.5kb downstream 500 false Chr01: 1285584-1286083 Phaseolus vulgaris
Phvul.001G016500 1.0kb upstream 1.0kb upstream 10304 true Chr01: 1275280-1285583 Phaseolus vulgaris
Phvul.001G016500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1275280-1276279 Phaseolus vulgaris
Phvul.001G016500 1.0kb downstream 1.0kb downstream 10304 true Chr01: 1276280-1286583 Phaseolus vulgaris
Phvul.001G016500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1285584-1286583 Phaseolus vulgaris
Phvul.001G016500 2.0kb upstream 2.0kb upstream 11304 true Chr01: 1274280-1285583 Phaseolus vulgaris
Phvul.001G016500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1274280-1276279 Phaseolus vulgaris
Phvul.001G016500 2.0kb downstream 2.0kb downstream 11304 true Chr01: 1276280-1287583 Phaseolus vulgaris
Phvul.001G016500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1285584-1287583 Phaseolus vulgaris
Phvul.001G016500 5.0kb upstream 5.0kb upstream 14304 true Chr01: 1271280-1285583 Phaseolus vulgaris
Phvul.001G016500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1271280-1276279 Phaseolus vulgaris
Phvul.001G016500 5.0kb downstream 5.0kb downstream 14304 true Chr01: 1276280-1290583 Phaseolus vulgaris
Phvul.001G016500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1285584-1290583 Phaseolus vulgaris
Phvul.001G016500 10.0kb upstream 10.0kb upstream 19304 true Chr01: 1266280-1285583 Phaseolus vulgaris
Phvul.001G016500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1266280-1276279 Phaseolus vulgaris
Phvul.001G016500 10.0kb downstream 10.0kb downstream 19304 true Chr01: 1276280-1295583 Phaseolus vulgaris
Phvul.001G016500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1285584-1295583 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312881 5265 Fabidae View MSA
124066332 5270 Rosid View MSA
123746749 5271 Pentapetalae View MSA
122792088 5272 Eudicot View MSA
122046785 5273 Angiosperm View MSA
121346379 5274 Embryophyte View MSA
123425691 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4363 0.0 36.8434    
cufflinks 9.33064 0.0 31.0533   Low
cufflinks 13.6565 0.0 38.2318    
cufflinks 9.25625 0.0 30.1912   Low
cufflinks 18.4909 0.0 60.41   High
cufflinks 13.3716 0.0 43.2849    
cufflinks 13.1126 0.0 36.6605    
cufflinks 9.46802 0.0 26.4375   Low
cufflinks 15.911 0.0 51.5894    
cufflinks 16.7086 0.0 54.3243   High
cufflinks 14.5728 0.0 48.4248    

0 Strain