Gene : Phvul.001G018700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11119:SF29 - NUCLEOBASE-ASCORBATE TRANSPORTER 3 Genomic Order:  188
Name:  ? Phvul.001G018700 Secondary Identifier:  ? PAC:37168866
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G018700 0.5kb upstream 0.5kb upstream 6954 true Chr01: 1495977-1502930 Phaseolus vulgaris
Phvul.001G018700 0.5kb upstream 0.5kb upstream 500 false Chr01: 1495977-1496476 Phaseolus vulgaris
Phvul.001G018700 0.5kb downstream 0.5kb downstream 6954 true Chr01: 1496477-1503430 Phaseolus vulgaris
Phvul.001G018700 0.5kb downstream 0.5kb downstream 500 false Chr01: 1502931-1503430 Phaseolus vulgaris
Phvul.001G018700 1.0kb upstream 1.0kb upstream 7454 true Chr01: 1495477-1502930 Phaseolus vulgaris
Phvul.001G018700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1495477-1496476 Phaseolus vulgaris
Phvul.001G018700 1.0kb downstream 1.0kb downstream 7454 true Chr01: 1496477-1503930 Phaseolus vulgaris
Phvul.001G018700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1502931-1503930 Phaseolus vulgaris
Phvul.001G018700 2.0kb upstream 2.0kb upstream 8454 true Chr01: 1494477-1502930 Phaseolus vulgaris
Phvul.001G018700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1494477-1496476 Phaseolus vulgaris
Phvul.001G018700 2.0kb downstream 2.0kb downstream 8454 true Chr01: 1496477-1504930 Phaseolus vulgaris
Phvul.001G018700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1502931-1504930 Phaseolus vulgaris
Phvul.001G018700 5.0kb upstream 5.0kb upstream 11454 true Chr01: 1491477-1502930 Phaseolus vulgaris
Phvul.001G018700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1491477-1496476 Phaseolus vulgaris
Phvul.001G018700 5.0kb downstream 5.0kb downstream 11454 true Chr01: 1496477-1507930 Phaseolus vulgaris
Phvul.001G018700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1502931-1507930 Phaseolus vulgaris
Phvul.001G018700 10.0kb upstream 10.0kb upstream 16454 true Chr01: 1486477-1502930 Phaseolus vulgaris
Phvul.001G018700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1486477-1496476 Phaseolus vulgaris
Phvul.001G018700 10.0kb downstream 10.0kb downstream 16454 true Chr01: 1496477-1512930 Phaseolus vulgaris
Phvul.001G018700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1502931-1512930 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304089 5265 Fabidae View MSA
124063260 5270 Rosid View MSA
123737835 5271 Pentapetalae View MSA
122788560 5272 Eudicot View MSA
122048256 5273 Angiosperm View MSA
121352133 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.48737 0.0 22.9971   Low
cufflinks 12.2161 0.0 32.2605    
cufflinks 10.6132 0.0 28.218    
cufflinks 9.19 0.0 24.8521   Low
cufflinks 36.0728 0.0 93.9398 High High
cufflinks 9.28684 0.0 25.0194   Low
cufflinks 21.7732 0.0 56.312    
cufflinks 14.1641 0.0 37.0445    
cufflinks 30.0476 0.0 77.7676    
cufflinks 40.1137 0.0 104.911 High High
cufflinks 24.9321 0.0 64.4447    

0 Strain