Gene : Phvul.001G018500 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31920:SF20 - B3 DOMAIN-CONTAINING PROTEIN REM23 Genomic Order:  186
Name:  ? Phvul.001G018500 Secondary Identifier:  ? PAC:37168372
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G018500 0.5kb upstream 0.5kb upstream 4402 true Chr01: 1478693-1483094 Phaseolus vulgaris
Phvul.001G018500 0.5kb upstream 0.5kb upstream 500 false Chr01: 1482595-1483094 Phaseolus vulgaris
Phvul.001G018500 0.5kb downstream 0.5kb downstream 4402 true Chr01: 1478193-1482594 Phaseolus vulgaris
Phvul.001G018500 0.5kb downstream 0.5kb downstream 500 false Chr01: 1478193-1478692 Phaseolus vulgaris
Phvul.001G018500 1.0kb upstream 1.0kb upstream 4902 true Chr01: 1478693-1483594 Phaseolus vulgaris
Phvul.001G018500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1482595-1483594 Phaseolus vulgaris
Phvul.001G018500 1.0kb downstream 1.0kb downstream 4902 true Chr01: 1477693-1482594 Phaseolus vulgaris
Phvul.001G018500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1477693-1478692 Phaseolus vulgaris
Phvul.001G018500 2.0kb upstream 2.0kb upstream 5902 true Chr01: 1478693-1484594 Phaseolus vulgaris
Phvul.001G018500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1482595-1484594 Phaseolus vulgaris
Phvul.001G018500 2.0kb downstream 2.0kb downstream 5902 true Chr01: 1476693-1482594 Phaseolus vulgaris
Phvul.001G018500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1476693-1478692 Phaseolus vulgaris
Phvul.001G018500 5.0kb upstream 5.0kb upstream 8902 true Chr01: 1478693-1487594 Phaseolus vulgaris
Phvul.001G018500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1482595-1487594 Phaseolus vulgaris
Phvul.001G018500 5.0kb downstream 5.0kb downstream 8902 true Chr01: 1473693-1482594 Phaseolus vulgaris
Phvul.001G018500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1473693-1478692 Phaseolus vulgaris
Phvul.001G018500 10.0kb upstream 10.0kb upstream 13902 true Chr01: 1478693-1492594 Phaseolus vulgaris
Phvul.001G018500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1482595-1492594 Phaseolus vulgaris
Phvul.001G018500 10.0kb downstream 10.0kb downstream 13902 true Chr01: 1468693-1482594 Phaseolus vulgaris
Phvul.001G018500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1468693-1478692 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299747 5265 Fabidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.12467 0.0 32.3418    
cufflinks 7.88998 0.0 42.5092    
cufflinks 9.00678 0.0 37.7059   High
cufflinks 4.88123 0.0 19.9107   Low
cufflinks 6.02578 0.0 22.8376    
cufflinks 8.74471 0.0 34.1874   High
cufflinks 6.82985 0.0 34.3513    
cufflinks 9.16636 0.0 41.7748   High
cufflinks 6.00487 0.0 26.1869    
cufflinks 7.15692 0.0 29.3078    
cufflinks 6.40614 0.0 30.1452    

0 Strain