Gene : Phvul.001G021100 P. vulgaris v2.1
Defline:  (1 of 1) K02604 - origin recognition complex subunit 2 (ORC2) Genomic Order:  212
Name:  ? Phvul.001G021100 Secondary Identifier:  ? PAC:37170752
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G021100 0.5kb upstream 0.5kb upstream 6217 true Chr01: 1688200-1694416 Phaseolus vulgaris
Phvul.001G021100 0.5kb upstream 0.5kb upstream 500 false Chr01: 1688200-1688699 Phaseolus vulgaris
Phvul.001G021100 0.5kb downstream 0.5kb downstream 6217 true Chr01: 1688700-1694916 Phaseolus vulgaris
Phvul.001G021100 0.5kb downstream 0.5kb downstream 500 false Chr01: 1694417-1694916 Phaseolus vulgaris
Phvul.001G021100 1.0kb upstream 1.0kb upstream 6717 true Chr01: 1687700-1694416 Phaseolus vulgaris
Phvul.001G021100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1687700-1688699 Phaseolus vulgaris
Phvul.001G021100 1.0kb downstream 1.0kb downstream 6717 true Chr01: 1688700-1695416 Phaseolus vulgaris
Phvul.001G021100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1694417-1695416 Phaseolus vulgaris
Phvul.001G021100 2.0kb upstream 2.0kb upstream 7717 true Chr01: 1686700-1694416 Phaseolus vulgaris
Phvul.001G021100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1686700-1688699 Phaseolus vulgaris
Phvul.001G021100 2.0kb downstream 2.0kb downstream 7717 true Chr01: 1688700-1696416 Phaseolus vulgaris
Phvul.001G021100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1694417-1696416 Phaseolus vulgaris
Phvul.001G021100 5.0kb upstream 5.0kb upstream 10717 true Chr01: 1683700-1694416 Phaseolus vulgaris
Phvul.001G021100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1683700-1688699 Phaseolus vulgaris
Phvul.001G021100 5.0kb downstream 5.0kb downstream 10717 true Chr01: 1688700-1699416 Phaseolus vulgaris
Phvul.001G021100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1694417-1699416 Phaseolus vulgaris
Phvul.001G021100 10.0kb upstream 10.0kb upstream 15717 true Chr01: 1678700-1694416 Phaseolus vulgaris
Phvul.001G021100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1678700-1688699 Phaseolus vulgaris
Phvul.001G021100 10.0kb downstream 10.0kb downstream 15717 true Chr01: 1688700-1704416 Phaseolus vulgaris
Phvul.001G021100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1694417-1704416 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302596 5265 Fabidae View MSA
124062197 5270 Rosid View MSA
123740768 5271 Pentapetalae View MSA
122786436 5272 Eudicot View MSA
122045665 5273 Angiosperm View MSA
121350473 5274 Embryophyte View MSA
123424910 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.90398 0.0 22.1225    
cufflinks 4.65866 0.0 13.7468    
cufflinks 3.23972 0.0 9.98361   Low
cufflinks 7.14729 0.0 20.2471    
cufflinks 5.26624 0.0 15.4289    
cufflinks 3.87013 0.0 11.6674    
cufflinks 7.07652 0.0 19.9741    
cufflinks 7.32823 0.0 20.5721    
cufflinks 15.8782 0.0 41.9128   High
cufflinks 2.96681 0.0 9.23269   Low
cufflinks 4.78681 0.0 14.15    

0 Strain