Gene : Phvul.001G021550 P. vulgaris v2.1
Genomic Order:  217 Name:  ? Phvul.001G021550
Secondary Identifier:  ? PAC:37169155
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G021550 0.5kb upstream 0.5kb upstream 1176 true Chr01: 1729200-1730375 Phaseolus vulgaris
Phvul.001G021550 0.5kb upstream 0.5kb upstream 500 false Chr01: 1729876-1730375 Phaseolus vulgaris
Phvul.001G021550 0.5kb downstream 0.5kb downstream 1176 true Chr01: 1728700-1729875 Phaseolus vulgaris
Phvul.001G021550 0.5kb downstream 0.5kb downstream 500 false Chr01: 1728700-1729199 Phaseolus vulgaris
Phvul.001G021550 1.0kb upstream 1.0kb upstream 1676 true Chr01: 1729200-1730875 Phaseolus vulgaris
Phvul.001G021550 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1729876-1730875 Phaseolus vulgaris
Phvul.001G021550 1.0kb downstream 1.0kb downstream 1676 true Chr01: 1728200-1729875 Phaseolus vulgaris
Phvul.001G021550 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1728200-1729199 Phaseolus vulgaris
Phvul.001G021550 2.0kb upstream 2.0kb upstream 2676 true Chr01: 1729200-1731875 Phaseolus vulgaris
Phvul.001G021550 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1729876-1731875 Phaseolus vulgaris
Phvul.001G021550 2.0kb downstream 2.0kb downstream 2676 true Chr01: 1727200-1729875 Phaseolus vulgaris
Phvul.001G021550 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1727200-1729199 Phaseolus vulgaris
Phvul.001G021550 5.0kb upstream 5.0kb upstream 5676 true Chr01: 1729200-1734875 Phaseolus vulgaris
Phvul.001G021550 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1729876-1734875 Phaseolus vulgaris
Phvul.001G021550 5.0kb downstream 5.0kb downstream 5676 true Chr01: 1724200-1729875 Phaseolus vulgaris
Phvul.001G021550 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1724200-1729199 Phaseolus vulgaris
Phvul.001G021550 10.0kb upstream 10.0kb upstream 10676 true Chr01: 1729200-1739875 Phaseolus vulgaris
Phvul.001G021550 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1729876-1739875 Phaseolus vulgaris
Phvul.001G021550 10.0kb downstream 10.0kb downstream 10676 true Chr01: 1719200-1729875 Phaseolus vulgaris
Phvul.001G021550 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1719200-1729199 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315344 5265 Fabidae View MSA
124072679 5270 Rosid View MSA
123744688 5271 Pentapetalae View MSA
122796930 5272 Eudicot View MSA
122050507 5273 Angiosperm View MSA
121311953 5274 Embryophyte View MSA
123349178 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.4238 0.0 57.0609   High
cufflinks 1.26238 0.0 4.73219    
cufflinks 2.25146 0.0 8.01899    
cufflinks 5.32769 0.0 17.2713    
cufflinks 2.35039 0.0 8.3766    
cufflinks 0.224071 0.0 0.966849 Low Low
cufflinks 0.9605 0.0 3.65538    
cufflinks 0.26438 0.0 1.11473 Low Low
cufflinks 1.10013 0.0 4.14086    
cufflinks 1.24032 0.0 4.67219    
cufflinks 3.32897 0.0 11.3988    

0 Strain