Gene : Phvul.001G021600 P. vulgaris v2.1
Defline:  (1 of 103) PF13499 - EF-hand domain pair (EF-hand_7) Genomic Order:  218
Name:  ? Phvul.001G021600 Secondary Identifier:  ? PAC:37170383
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G021600 0.5kb upstream 0.5kb upstream 1169 true Chr01: 1738515-1739683 Phaseolus vulgaris
Phvul.001G021600 0.5kb upstream 0.5kb upstream 500 false Chr01: 1739184-1739683 Phaseolus vulgaris
Phvul.001G021600 0.5kb downstream 0.5kb downstream 1169 true Chr01: 1738015-1739183 Phaseolus vulgaris
Phvul.001G021600 0.5kb downstream 0.5kb downstream 500 false Chr01: 1738015-1738514 Phaseolus vulgaris
Phvul.001G021600 1.0kb upstream 1.0kb upstream 1669 true Chr01: 1738515-1740183 Phaseolus vulgaris
Phvul.001G021600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1739184-1740183 Phaseolus vulgaris
Phvul.001G021600 1.0kb downstream 1.0kb downstream 1669 true Chr01: 1737515-1739183 Phaseolus vulgaris
Phvul.001G021600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1737515-1738514 Phaseolus vulgaris
Phvul.001G021600 2.0kb upstream 2.0kb upstream 2669 true Chr01: 1738515-1741183 Phaseolus vulgaris
Phvul.001G021600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1739184-1741183 Phaseolus vulgaris
Phvul.001G021600 2.0kb downstream 2.0kb downstream 2669 true Chr01: 1736515-1739183 Phaseolus vulgaris
Phvul.001G021600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1736515-1738514 Phaseolus vulgaris
Phvul.001G021600 5.0kb upstream 5.0kb upstream 5669 true Chr01: 1738515-1744183 Phaseolus vulgaris
Phvul.001G021600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1739184-1744183 Phaseolus vulgaris
Phvul.001G021600 5.0kb downstream 5.0kb downstream 5669 true Chr01: 1733515-1739183 Phaseolus vulgaris
Phvul.001G021600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1733515-1738514 Phaseolus vulgaris
Phvul.001G021600 10.0kb upstream 10.0kb upstream 10669 true Chr01: 1738515-1749183 Phaseolus vulgaris
Phvul.001G021600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1739184-1749183 Phaseolus vulgaris
Phvul.001G021600 10.0kb downstream 10.0kb downstream 10669 true Chr01: 1728515-1739183 Phaseolus vulgaris
Phvul.001G021600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1728515-1738514 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315344 5265 Fabidae View MSA
124072679 5270 Rosid View MSA
123744688 5271 Pentapetalae View MSA
122796930 5272 Eudicot View MSA
122050507 5273 Angiosperm View MSA
121311953 5274 Embryophyte View MSA
123349178 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.7626 0.0 115.424 High  
cufflinks 8.24774 0.0 25.7182    
cufflinks 31.9756 0.0 86.5209    
cufflinks 23.0623 0.0 64.2755    
cufflinks 27.5666 0.0 75.7215    
cufflinks 6.5736 0.0 20.9837    
cufflinks 12.5281 0.0 37.026    
cufflinks 4.07478 0.0 13.6584    
cufflinks 2.68847 0.0 9.45665    
cufflinks 0.452559 0.0 1.85923   Low
cufflinks 56.937 0.0 148.729 High High

0 Strain