Gene : Phvul.001G019900 P. vulgaris v2.1
Defline:  (1 of 2) 1.14.99.3 - Heme oxygenase (biliverdin-producing) / Heme oxygenase (decyclizing) Genomic Order:  200
Name:  ? Phvul.001G019900 Secondary Identifier:  ? PAC:37168522
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5874 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G019900 0.5kb upstream 0.5kb upstream 4294 true Chr01: 1616621-1620914 Phaseolus vulgaris
Phvul.001G019900 0.5kb upstream 0.5kb upstream 500 false Chr01: 1620415-1620914 Phaseolus vulgaris
Phvul.001G019900 0.5kb downstream 0.5kb downstream 4294 true Chr01: 1616121-1620414 Phaseolus vulgaris
Phvul.001G019900 0.5kb downstream 0.5kb downstream 500 false Chr01: 1616121-1616620 Phaseolus vulgaris
Phvul.001G019900 1.0kb upstream 1.0kb upstream 4794 true Chr01: 1616621-1621414 Phaseolus vulgaris
Phvul.001G019900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1620415-1621414 Phaseolus vulgaris
Phvul.001G019900 1.0kb downstream 1.0kb downstream 4794 true Chr01: 1615621-1620414 Phaseolus vulgaris
Phvul.001G019900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1615621-1616620 Phaseolus vulgaris
Phvul.001G019900 2.0kb upstream 2.0kb upstream 5794 true Chr01: 1616621-1622414 Phaseolus vulgaris
Phvul.001G019900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1620415-1622414 Phaseolus vulgaris
Phvul.001G019900 2.0kb downstream 2.0kb downstream 5794 true Chr01: 1614621-1620414 Phaseolus vulgaris
Phvul.001G019900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1614621-1616620 Phaseolus vulgaris
Phvul.001G019900 5.0kb upstream 5.0kb upstream 8794 true Chr01: 1616621-1625414 Phaseolus vulgaris
Phvul.001G019900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1620415-1625414 Phaseolus vulgaris
Phvul.001G019900 5.0kb downstream 5.0kb downstream 8794 true Chr01: 1611621-1620414 Phaseolus vulgaris
Phvul.001G019900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1611621-1616620 Phaseolus vulgaris
Phvul.001G019900 10.0kb upstream 10.0kb upstream 13794 true Chr01: 1616621-1630414 Phaseolus vulgaris
Phvul.001G019900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1620415-1630414 Phaseolus vulgaris
Phvul.001G019900 10.0kb downstream 10.0kb downstream 13794 true Chr01: 1606621-1620414 Phaseolus vulgaris
Phvul.001G019900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1606621-1616620 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310013 5265 Fabidae View MSA
124063078 5270 Rosid View MSA
123741198 5271 Pentapetalae View MSA
122793273 5272 Eudicot View MSA
122045580 5273 Angiosperm View MSA
121310469 5274 Embryophyte View MSA
123347942 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2699 0.0 28.7669    
cufflinks 15.576 0.0 42.195    
cufflinks 24.3558 0.0 63.8472   High
cufflinks 14.0306 0.0 38.3661    
cufflinks 9.09592 0.0 25.88    
cufflinks 25.7225 0.0 67.3198   High
cufflinks 5.24128 0.0 15.7699   Low
cufflinks 7.36583 0.0 21.3204    
cufflinks 5.07027 0.0 15.3669   Low
cufflinks 8.48569 0.0 24.2961    
cufflinks 9.61416 0.0 27.1997    

0 Strain