Gene : Phvul.001G004900 P. vulgaris v2.1
Defline:  (1 of 15) PF11961 - Domain of unknown function (DUF3475) (DUF3475) Genomic Order:  48
Name:  ? Phvul.001G004900 Secondary Identifier:  ? PAC:37170559
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G004900 0.5kb upstream 0.5kb upstream 5921 true Chr01: 312539-318459 Phaseolus vulgaris
Phvul.001G004900 0.5kb upstream 0.5kb upstream 500 false Chr01: 312539-313038 Phaseolus vulgaris
Phvul.001G004900 0.5kb downstream 0.5kb downstream 5921 true Chr01: 313039-318959 Phaseolus vulgaris
Phvul.001G004900 0.5kb downstream 0.5kb downstream 500 false Chr01: 318460-318959 Phaseolus vulgaris
Phvul.001G004900 1.0kb upstream 1.0kb upstream 6421 true Chr01: 312039-318459 Phaseolus vulgaris
Phvul.001G004900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 312039-313038 Phaseolus vulgaris
Phvul.001G004900 1.0kb downstream 1.0kb downstream 6421 true Chr01: 313039-319459 Phaseolus vulgaris
Phvul.001G004900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 318460-319459 Phaseolus vulgaris
Phvul.001G004900 2.0kb upstream 2.0kb upstream 7421 true Chr01: 311039-318459 Phaseolus vulgaris
Phvul.001G004900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 311039-313038 Phaseolus vulgaris
Phvul.001G004900 2.0kb downstream 2.0kb downstream 7421 true Chr01: 313039-320459 Phaseolus vulgaris
Phvul.001G004900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 318460-320459 Phaseolus vulgaris
Phvul.001G004900 5.0kb upstream 5.0kb upstream 10421 true Chr01: 308039-318459 Phaseolus vulgaris
Phvul.001G004900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 308039-313038 Phaseolus vulgaris
Phvul.001G004900 5.0kb downstream 5.0kb downstream 10421 true Chr01: 313039-323459 Phaseolus vulgaris
Phvul.001G004900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 318460-323459 Phaseolus vulgaris
Phvul.001G004900 10.0kb upstream 10.0kb upstream 15421 true Chr01: 303039-318459 Phaseolus vulgaris
Phvul.001G004900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 303039-313038 Phaseolus vulgaris
Phvul.001G004900 10.0kb downstream 10.0kb downstream 15421 true Chr01: 313039-328459 Phaseolus vulgaris
Phvul.001G004900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 318460-328459 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026584 5273 Angiosperm View MSA
122296258 5265 Fabidae View MSA
124061496 5270 Rosid View MSA
123736694 5271 Pentapetalae View MSA
122794178 5272 Eudicot View MSA
121296402 5274 Embryophyte View MSA
123334571 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.26604 0.0 17.6358    
cufflinks 1.18847 0.0 6.29299    
cufflinks 0.20219 0.0 0.794121 Low Low
cufflinks 1.03137 0.0 4.17703    
cufflinks 0.628478 0.0 3.73944    
cufflinks 2.00355 0.0 6.63169    
cufflinks 13.2994 0.0 39.1578   High
cufflinks 7.18547 0.0 26.1301    
cufflinks 14.6395 0.0 42.5828   High
cufflinks 2.80657 0.0 8.76516    
cufflinks 0.792852 0.0 3.44471    

0 Strain