Gene : Phvul.001G010900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23421:SF51 - BETA-GALACTOSIDASE 5 Genomic Order:  108
Name:  ? Phvul.001G010900 Secondary Identifier:  ? PAC:37169301
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G010900 0.5kb upstream 0.5kb upstream 6565 true Chr01: 830550-837114 Phaseolus vulgaris
Phvul.001G010900 0.5kb upstream 0.5kb upstream 500 false Chr01: 836615-837114 Phaseolus vulgaris
Phvul.001G010900 0.5kb downstream 0.5kb downstream 6565 true Chr01: 830050-836614 Phaseolus vulgaris
Phvul.001G010900 0.5kb downstream 0.5kb downstream 500 false Chr01: 830050-830549 Phaseolus vulgaris
Phvul.001G010900 1.0kb upstream 1.0kb upstream 7065 true Chr01: 830550-837614 Phaseolus vulgaris
Phvul.001G010900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 836615-837614 Phaseolus vulgaris
Phvul.001G010900 1.0kb downstream 1.0kb downstream 7065 true Chr01: 829550-836614 Phaseolus vulgaris
Phvul.001G010900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 829550-830549 Phaseolus vulgaris
Phvul.001G010900 2.0kb upstream 2.0kb upstream 8065 true Chr01: 830550-838614 Phaseolus vulgaris
Phvul.001G010900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 836615-838614 Phaseolus vulgaris
Phvul.001G010900 2.0kb downstream 2.0kb downstream 8065 true Chr01: 828550-836614 Phaseolus vulgaris
Phvul.001G010900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 828550-830549 Phaseolus vulgaris
Phvul.001G010900 5.0kb upstream 5.0kb upstream 11065 true Chr01: 830550-841614 Phaseolus vulgaris
Phvul.001G010900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 836615-841614 Phaseolus vulgaris
Phvul.001G010900 5.0kb downstream 5.0kb downstream 11065 true Chr01: 825550-836614 Phaseolus vulgaris
Phvul.001G010900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 825550-830549 Phaseolus vulgaris
Phvul.001G010900 10.0kb upstream 10.0kb upstream 16065 true Chr01: 830550-846614 Phaseolus vulgaris
Phvul.001G010900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 836615-846614 Phaseolus vulgaris
Phvul.001G010900 10.0kb downstream 10.0kb downstream 16065 true Chr01: 820550-836614 Phaseolus vulgaris
Phvul.001G010900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 820550-830549 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028817 5273 Angiosperm View MSA
122315125 5265 Fabidae View MSA
124072960 5270 Rosid View MSA
123753261 5271 Pentapetalae View MSA
122798235 5272 Eudicot View MSA
121298254 5274 Embryophyte View MSA
123428650 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.41736 0.0 9.65086   Low
cufflinks 32.8109 0.0 87.2304 High  
cufflinks 81.758 0.0 239.966 High  
cufflinks 17.7252 0.0 45.8274    
cufflinks 58.153 0.0 162.159 High  
cufflinks 40.9813 0.0 111.073 High  
cufflinks 49.3933 0.0 136.248 High  
cufflinks 17.3732 0.0 44.9777    
cufflinks 125.777 0.0 392.184 High High
cufflinks 37.8298 0.0 101.629 High  
cufflinks 50.1927 0.0 137.878 High  

0 Strain