Gene : Phvul.001G011500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31898:SF1 - TRANSMEMBRANE PROTEIN 136 Genomic Order:  114
Name:  ? Phvul.001G011500 Secondary Identifier:  ? PAC:37170873
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G011500 0.5kb upstream 0.5kb upstream 3080 true Chr01: 885918-888997 Phaseolus vulgaris
Phvul.001G011500 0.5kb upstream 0.5kb upstream 500 false Chr01: 888498-888997 Phaseolus vulgaris
Phvul.001G011500 0.5kb downstream 0.5kb downstream 3080 true Chr01: 885418-888497 Phaseolus vulgaris
Phvul.001G011500 0.5kb downstream 0.5kb downstream 500 false Chr01: 885418-885917 Phaseolus vulgaris
Phvul.001G011500 1.0kb upstream 1.0kb upstream 3580 true Chr01: 885918-889497 Phaseolus vulgaris
Phvul.001G011500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 888498-889497 Phaseolus vulgaris
Phvul.001G011500 1.0kb downstream 1.0kb downstream 3580 true Chr01: 884918-888497 Phaseolus vulgaris
Phvul.001G011500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 884918-885917 Phaseolus vulgaris
Phvul.001G011500 2.0kb upstream 2.0kb upstream 4580 true Chr01: 885918-890497 Phaseolus vulgaris
Phvul.001G011500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 888498-890497 Phaseolus vulgaris
Phvul.001G011500 2.0kb downstream 2.0kb downstream 4580 true Chr01: 883918-888497 Phaseolus vulgaris
Phvul.001G011500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 883918-885917 Phaseolus vulgaris
Phvul.001G011500 5.0kb upstream 5.0kb upstream 7580 true Chr01: 885918-893497 Phaseolus vulgaris
Phvul.001G011500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 888498-893497 Phaseolus vulgaris
Phvul.001G011500 5.0kb downstream 5.0kb downstream 7580 true Chr01: 880918-888497 Phaseolus vulgaris
Phvul.001G011500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 880918-885917 Phaseolus vulgaris
Phvul.001G011500 10.0kb upstream 10.0kb upstream 12580 true Chr01: 885918-898497 Phaseolus vulgaris
Phvul.001G011500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 888498-898497 Phaseolus vulgaris
Phvul.001G011500 10.0kb downstream 10.0kb downstream 12580 true Chr01: 875918-888497 Phaseolus vulgaris
Phvul.001G011500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 875918-885917 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304729 5265 Fabidae View MSA
124061810 5270 Rosid View MSA
123740505 5271 Pentapetalae View MSA
122793089 5272 Eudicot View MSA
122047305 5273 Angiosperm View MSA
121344019 5274 Embryophyte View MSA
123425405 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.65652 0.0 5.78913    
cufflinks 2.14067 0.0 7.28283    
cufflinks 28.9799 0.0 75.7812   High
cufflinks 11.5447 0.0 32.8233    
cufflinks 4.68038 0.0 14.6814    
cufflinks 23.9603 0.0 63.4992   High
cufflinks 0.289517 0.0 1.17554 Low Low
cufflinks 0.286717 0.0 1.15869 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.802241 0.0 3.00361    
cufflinks 4.52429 0.0 14.2384    

0 Strain