Gene : Phvul.001G010400 P. vulgaris v2.1
Defline:  (1 of 180) PF00847 - AP2 domain (AP2) Genomic Order:  103
Name:  ? Phvul.001G010400 Secondary Identifier:  ? PAC:37170930
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G010400 0.5kb upstream 0.5kb upstream 1902 true Chr01: 811116-813017 Phaseolus vulgaris
Phvul.001G010400 0.5kb upstream 0.5kb upstream 500 false Chr01: 812518-813017 Phaseolus vulgaris
Phvul.001G010400 0.5kb downstream 0.5kb downstream 1902 true Chr01: 810616-812517 Phaseolus vulgaris
Phvul.001G010400 0.5kb downstream 0.5kb downstream 500 false Chr01: 810616-811115 Phaseolus vulgaris
Phvul.001G010400 1.0kb upstream 1.0kb upstream 2402 true Chr01: 811116-813517 Phaseolus vulgaris
Phvul.001G010400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 812518-813517 Phaseolus vulgaris
Phvul.001G010400 1.0kb downstream 1.0kb downstream 2402 true Chr01: 810116-812517 Phaseolus vulgaris
Phvul.001G010400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 810116-811115 Phaseolus vulgaris
Phvul.001G010400 2.0kb upstream 2.0kb upstream 3402 true Chr01: 811116-814517 Phaseolus vulgaris
Phvul.001G010400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 812518-814517 Phaseolus vulgaris
Phvul.001G010400 2.0kb downstream 2.0kb downstream 3402 true Chr01: 809116-812517 Phaseolus vulgaris
Phvul.001G010400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 809116-811115 Phaseolus vulgaris
Phvul.001G010400 5.0kb upstream 5.0kb upstream 6402 true Chr01: 811116-817517 Phaseolus vulgaris
Phvul.001G010400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 812518-817517 Phaseolus vulgaris
Phvul.001G010400 5.0kb downstream 5.0kb downstream 6402 true Chr01: 806116-812517 Phaseolus vulgaris
Phvul.001G010400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 806116-811115 Phaseolus vulgaris
Phvul.001G010400 10.0kb upstream 10.0kb upstream 11402 true Chr01: 811116-822517 Phaseolus vulgaris
Phvul.001G010400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 812518-822517 Phaseolus vulgaris
Phvul.001G010400 10.0kb downstream 10.0kb downstream 11402 true Chr01: 801116-812517 Phaseolus vulgaris
Phvul.001G010400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 801116-811115 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312723 5265 Fabidae View MSA
124072690 5270 Rosid View MSA
123750816 5271 Pentapetalae View MSA
122794401 5272 Eudicot View MSA
122049756 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349420 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.159441 0.0 0.661378 Low  
cufflinks 1.36574 0.0 4.71708   High
cufflinks 0.180253 0.0 0.738755 Low  
cufflinks 0.0912916 0.0 0.395882 Low  
cufflinks 1.12497 0.0 3.9604   High
cufflinks 0.0336218 0.0 0.162108 Low Low
cufflinks 0.553658 0.0 2.06909 Low  
cufflinks 0.147138 0.0 0.612189 Low  
cufflinks 0.807373 0.0 2.92011   High
cufflinks 0.085385 0.0 0.376099 Low  
cufflinks 0.0802522 0.0 0.355059 Low  

0 Strain