Gene : Phvul.001G013200 P. vulgaris v2.1
Genomic Order:  131 Name:  ? Phvul.001G013200
Secondary Identifier:  ? PAC:37170642
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G013200 0.5kb upstream 0.5kb upstream 2398 true Chr01: 1008631-1011028 Phaseolus vulgaris
Phvul.001G013200 0.5kb upstream 0.5kb upstream 500 false Chr01: 1010529-1011028 Phaseolus vulgaris
Phvul.001G013200 0.5kb downstream 0.5kb downstream 2398 true Chr01: 1008131-1010528 Phaseolus vulgaris
Phvul.001G013200 0.5kb downstream 0.5kb downstream 500 false Chr01: 1008131-1008630 Phaseolus vulgaris
Phvul.001G013200 1.0kb upstream 1.0kb upstream 2898 true Chr01: 1008631-1011528 Phaseolus vulgaris
Phvul.001G013200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1010529-1011528 Phaseolus vulgaris
Phvul.001G013200 1.0kb downstream 1.0kb downstream 2898 true Chr01: 1007631-1010528 Phaseolus vulgaris
Phvul.001G013200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1007631-1008630 Phaseolus vulgaris
Phvul.001G013200 2.0kb upstream 2.0kb upstream 3898 true Chr01: 1008631-1012528 Phaseolus vulgaris
Phvul.001G013200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1010529-1012528 Phaseolus vulgaris
Phvul.001G013200 2.0kb downstream 2.0kb downstream 3898 true Chr01: 1006631-1010528 Phaseolus vulgaris
Phvul.001G013200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1006631-1008630 Phaseolus vulgaris
Phvul.001G013200 5.0kb upstream 5.0kb upstream 6898 true Chr01: 1008631-1015528 Phaseolus vulgaris
Phvul.001G013200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1010529-1015528 Phaseolus vulgaris
Phvul.001G013200 5.0kb downstream 5.0kb downstream 6898 true Chr01: 1003631-1010528 Phaseolus vulgaris
Phvul.001G013200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1003631-1008630 Phaseolus vulgaris
Phvul.001G013200 10.0kb upstream 10.0kb upstream 11898 true Chr01: 1008631-1020528 Phaseolus vulgaris
Phvul.001G013200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1010529-1020528 Phaseolus vulgaris
Phvul.001G013200 10.0kb downstream 10.0kb downstream 11898 true Chr01: 998631-1010528 Phaseolus vulgaris
Phvul.001G013200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 998631-1008630 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302664 5265 Fabidae View MSA
124061990 5270 Rosid View MSA
123741829 5271 Pentapetalae View MSA
122794176 5272 Eudicot View MSA
122047280 5273 Angiosperm View MSA
121349070 5274 Embryophyte View MSA
123381150 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.35155 0.0 11.3131    
cufflinks 32.0214 0.0 85.3599   High
cufflinks 1.32569 0.0 4.88917    
cufflinks 1.67619 0.0 6.11854    
cufflinks 6.37401 0.0 20.2189    
cufflinks 0.0668166 0.0 0.322157 Low Low
cufflinks 5.92486 0.0 18.7069    
cufflinks 1.23912 0.0 4.57593    
cufflinks 5.99718 0.0 18.9477    
cufflinks 123.882 0.0 323.966 High High
cufflinks 7.54868 0.0 23.3959    

0 Strain