Gene : Phvul.001G012000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR15160:SF3 - BIFUNCTIONAL NUCLEASE 1-RELATED Genomic Order:  119
Name:  ? Phvul.001G012000 Secondary Identifier:  ? PAC:37169646
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G012000 0.5kb upstream 0.5kb upstream 5723 true Chr01: 914392-920114 Phaseolus vulgaris
Phvul.001G012000 0.5kb upstream 0.5kb upstream 500 false Chr01: 914392-914891 Phaseolus vulgaris
Phvul.001G012000 0.5kb downstream 0.5kb downstream 5723 true Chr01: 914892-920614 Phaseolus vulgaris
Phvul.001G012000 0.5kb downstream 0.5kb downstream 500 false Chr01: 920115-920614 Phaseolus vulgaris
Phvul.001G012000 1.0kb upstream 1.0kb upstream 6223 true Chr01: 913892-920114 Phaseolus vulgaris
Phvul.001G012000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 913892-914891 Phaseolus vulgaris
Phvul.001G012000 1.0kb downstream 1.0kb downstream 6223 true Chr01: 914892-921114 Phaseolus vulgaris
Phvul.001G012000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 920115-921114 Phaseolus vulgaris
Phvul.001G012000 2.0kb upstream 2.0kb upstream 7223 true Chr01: 912892-920114 Phaseolus vulgaris
Phvul.001G012000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 912892-914891 Phaseolus vulgaris
Phvul.001G012000 2.0kb downstream 2.0kb downstream 7223 true Chr01: 914892-922114 Phaseolus vulgaris
Phvul.001G012000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 920115-922114 Phaseolus vulgaris
Phvul.001G012000 5.0kb upstream 5.0kb upstream 10223 true Chr01: 909892-920114 Phaseolus vulgaris
Phvul.001G012000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 909892-914891 Phaseolus vulgaris
Phvul.001G012000 5.0kb downstream 5.0kb downstream 10223 true Chr01: 914892-925114 Phaseolus vulgaris
Phvul.001G012000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 920115-925114 Phaseolus vulgaris
Phvul.001G012000 10.0kb upstream 10.0kb upstream 15223 true Chr01: 904892-920114 Phaseolus vulgaris
Phvul.001G012000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 904892-914891 Phaseolus vulgaris
Phvul.001G012000 10.0kb downstream 10.0kb downstream 15223 true Chr01: 914892-930114 Phaseolus vulgaris
Phvul.001G012000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 920115-930114 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311227 5265 Fabidae View MSA
124063334 5270 Rosid View MSA
123751879 5271 Pentapetalae View MSA
122794039 5272 Eudicot View MSA
122042536 5273 Angiosperm View MSA
121348555 5274 Embryophyte View MSA
123425976 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 222.754 0.0 689.173 High High
cufflinks 32.99 0.0 85.3765 High  
cufflinks 225.312 0.0 700.829 High High
cufflinks 26.8825 0.0 69.5231    
cufflinks 49.5711 0.0 129.575 High  
cufflinks 45.5425 0.0 119.064 High  
cufflinks 18.9175 0.0 49.2029    
cufflinks 9.56738 0.0 25.9256   Low
cufflinks 32.4095 0.0 83.8514 High  
cufflinks 94.5345 0.0 261.186 High  
cufflinks 29.8095 0.0 77.0531    

0 Strain