Gene : Phvul.001G000600 P. vulgaris v2.1
Defline:  (1 of 1) K15362 - fanconi anemia group J protein (BRIP1, BACH1, FANCJ) Genomic Order:  3
Name:  ? Phvul.001G000600 Secondary Identifier:  ? PAC:37169589
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G000600 0.5kb upstream 0.5kb upstream 13221 true Chr01: 15561-28781 Phaseolus vulgaris
Phvul.001G000600 0.5kb upstream 0.5kb upstream 500 false Chr01: 15561-16060 Phaseolus vulgaris
Phvul.001G000600 0.5kb downstream 0.5kb downstream 13221 true Chr01: 16061-29281 Phaseolus vulgaris
Phvul.001G000600 0.5kb downstream 0.5kb downstream 500 false Chr01: 28782-29281 Phaseolus vulgaris
Phvul.001G000600 1.0kb upstream 1.0kb upstream 13721 true Chr01: 15061-28781 Phaseolus vulgaris
Phvul.001G000600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 15061-16060 Phaseolus vulgaris
Phvul.001G000600 1.0kb downstream 1.0kb downstream 13721 true Chr01: 16061-29781 Phaseolus vulgaris
Phvul.001G000600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 28782-29781 Phaseolus vulgaris
Phvul.001G000600 2.0kb upstream 2.0kb upstream 14721 true Chr01: 14061-28781 Phaseolus vulgaris
Phvul.001G000600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 14061-16060 Phaseolus vulgaris
Phvul.001G000600 2.0kb downstream 2.0kb downstream 14721 true Chr01: 16061-30781 Phaseolus vulgaris
Phvul.001G000600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 28782-30781 Phaseolus vulgaris
Phvul.001G000600 5.0kb upstream 5.0kb upstream 17721 true Chr01: 11061-28781 Phaseolus vulgaris
Phvul.001G000600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 11061-16060 Phaseolus vulgaris
Phvul.001G000600 5.0kb downstream 5.0kb downstream 17721 true Chr01: 16061-33781 Phaseolus vulgaris
Phvul.001G000600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 28782-33781 Phaseolus vulgaris
Phvul.001G000600 10.0kb upstream 10.0kb upstream 22721 true Chr01: 6061-28781 Phaseolus vulgaris
Phvul.001G000600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 6061-16060 Phaseolus vulgaris
Phvul.001G000600 10.0kb downstream 10.0kb downstream 22721 true Chr01: 16061-38781 Phaseolus vulgaris
Phvul.001G000600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 28782-38781 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308940 5265 Fabidae View MSA
124073363 5270 Rosid View MSA
123739603 5271 Pentapetalae View MSA
122790875 5272 Eudicot View MSA
122044733 5273 Angiosperm View MSA
121346490 5274 Embryophyte View MSA
123426390 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.565925 0.0 2.88834   Low
cufflinks 2.63538 0.0 8.83458    
cufflinks 1.48536 0.0 5.78168    
cufflinks 0.567775 0.0 2.8461   Low
cufflinks 1.86456 0.0 8.20248    
cufflinks 3.87266 0.0 12.0579   High
cufflinks 3.05468 0.0 13.5603    
cufflinks 3.91869 0.0 15.7138   High
cufflinks 3.14476 0.0 15.0288    
cufflinks 0.281977 0.0 1.6578 Low Low
cufflinks 1.54469 0.0 6.07137    

0 Strain