Gene : Phvul.001G001300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24096:SF186 - 4-COUMARATE--COA LIGASE-LIKE 2-RELATED Genomic Order:  10
Name:  ? Phvul.001G001300 Secondary Identifier:  ? PAC:37169183
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G001300 0.5kb upstream 0.5kb upstream 3383 true Chr01: 71552-74934 Phaseolus vulgaris
Phvul.001G001300 0.5kb upstream 0.5kb upstream 500 false Chr01: 71552-72051 Phaseolus vulgaris
Phvul.001G001300 0.5kb downstream 0.5kb downstream 3383 true Chr01: 72052-75434 Phaseolus vulgaris
Phvul.001G001300 0.5kb downstream 0.5kb downstream 500 false Chr01: 74935-75434 Phaseolus vulgaris
Phvul.001G001300 1.0kb upstream 1.0kb upstream 3883 true Chr01: 71052-74934 Phaseolus vulgaris
Phvul.001G001300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 71052-72051 Phaseolus vulgaris
Phvul.001G001300 1.0kb downstream 1.0kb downstream 3883 true Chr01: 72052-75934 Phaseolus vulgaris
Phvul.001G001300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 74935-75934 Phaseolus vulgaris
Phvul.001G001300 2.0kb upstream 2.0kb upstream 4883 true Chr01: 70052-74934 Phaseolus vulgaris
Phvul.001G001300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 70052-72051 Phaseolus vulgaris
Phvul.001G001300 2.0kb downstream 2.0kb downstream 4883 true Chr01: 72052-76934 Phaseolus vulgaris
Phvul.001G001300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 74935-76934 Phaseolus vulgaris
Phvul.001G001300 5.0kb upstream 5.0kb upstream 7883 true Chr01: 67052-74934 Phaseolus vulgaris
Phvul.001G001300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 67052-72051 Phaseolus vulgaris
Phvul.001G001300 5.0kb downstream 5.0kb downstream 7883 true Chr01: 72052-79934 Phaseolus vulgaris
Phvul.001G001300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 74935-79934 Phaseolus vulgaris
Phvul.001G001300 10.0kb upstream 10.0kb upstream 12883 true Chr01: 62052-74934 Phaseolus vulgaris
Phvul.001G001300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 62052-72051 Phaseolus vulgaris
Phvul.001G001300 10.0kb downstream 10.0kb downstream 12883 true Chr01: 72052-84934 Phaseolus vulgaris
Phvul.001G001300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 74935-84934 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299586 5265 Fabidae View MSA
124062315 5270 Rosid View MSA
123736531 5271 Pentapetalae View MSA
122785928 5272 Eudicot View MSA
122043430 5273 Angiosperm View MSA
121350022 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.72621 0.0 25.644   Low
cufflinks 13.7121 0.0 35.576    
cufflinks 8.86104 0.0 23.5194   Low
cufflinks 14.4289 0.0 37.3395    
cufflinks 20.4205 0.0 52.8272    
cufflinks 15.9021 0.0 41.1387    
cufflinks 34.33 0.0 91.0381 High High
cufflinks 22.7104 0.0 58.8821    
cufflinks 30.9224 0.0 81.3669 High High
cufflinks 26.1903 0.0 68.0595    
cufflinks 18.8434 0.0 48.7175    

0 Strain