Gene : Phvul.001G001100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24413:SF79 - BTB/POZ DOMAIN-CONTAINING PROTEIN 9 Genomic Order:  8
Name:  ? Phvul.001G001100 Secondary Identifier:  ? PAC:37167716
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G001100 0.5kb upstream 0.5kb upstream 7065 true Chr01: 52865-59929 Phaseolus vulgaris
Phvul.001G001100 0.5kb upstream 0.5kb upstream 500 false Chr01: 52865-53364 Phaseolus vulgaris
Phvul.001G001100 0.5kb downstream 0.5kb downstream 7065 true Chr01: 53365-60429 Phaseolus vulgaris
Phvul.001G001100 0.5kb downstream 0.5kb downstream 500 false Chr01: 59930-60429 Phaseolus vulgaris
Phvul.001G001100 1.0kb upstream 1.0kb upstream 7565 true Chr01: 52365-59929 Phaseolus vulgaris
Phvul.001G001100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 52365-53364 Phaseolus vulgaris
Phvul.001G001100 1.0kb downstream 1.0kb downstream 7565 true Chr01: 53365-60929 Phaseolus vulgaris
Phvul.001G001100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 59930-60929 Phaseolus vulgaris
Phvul.001G001100 2.0kb upstream 2.0kb upstream 8565 true Chr01: 51365-59929 Phaseolus vulgaris
Phvul.001G001100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 51365-53364 Phaseolus vulgaris
Phvul.001G001100 2.0kb downstream 2.0kb downstream 8565 true Chr01: 53365-61929 Phaseolus vulgaris
Phvul.001G001100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 59930-61929 Phaseolus vulgaris
Phvul.001G001100 5.0kb upstream 5.0kb upstream 11565 true Chr01: 48365-59929 Phaseolus vulgaris
Phvul.001G001100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48365-53364 Phaseolus vulgaris
Phvul.001G001100 5.0kb downstream 5.0kb downstream 11565 true Chr01: 53365-64929 Phaseolus vulgaris
Phvul.001G001100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 59930-64929 Phaseolus vulgaris
Phvul.001G001100 10.0kb upstream 10.0kb upstream 16565 true Chr01: 43365-59929 Phaseolus vulgaris
Phvul.001G001100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 43365-53364 Phaseolus vulgaris
Phvul.001G001100 10.0kb downstream 10.0kb downstream 16565 true Chr01: 53365-69929 Phaseolus vulgaris
Phvul.001G001100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 59930-69929 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302543 5265 Fabidae View MSA
124067145 5270 Rosid View MSA
123738329 5271 Pentapetalae View MSA
122792871 5272 Eudicot View MSA
122043154 5273 Angiosperm View MSA
121346237 5274 Embryophyte View MSA
123426134 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6343 0.0 40.2035    
cufflinks 10.0816 0.0 32.5386    
cufflinks 16.0843 0.0 50.8778    
cufflinks 2.92329 0.0 10.3137   Low
cufflinks 25.5454 0.0 82.1946   High
cufflinks 4.02838 0.0 15.2029   Low
cufflinks 6.69717 0.0 20.6257    
cufflinks 7.08803 0.0 20.9889    
cufflinks 17.3828 0.0 54.738    
cufflinks 13.4151 0.0 42.4315    
cufflinks 4.88484 0.0 17.8331    

0 Strain