Gene : Phvul.001G002800 P. vulgaris v2.1
Defline:  (1 of 5) PTHR24349:SF89 - CALCIUM-DEPENDENT PROTEIN KINASE 29 Genomic Order:  25
Name:  ? Phvul.001G002800 Secondary Identifier:  ? PAC:37169171
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G002800 0.5kb upstream 0.5kb upstream 5219 true Chr01: 165498-170716 Phaseolus vulgaris
Phvul.001G002800 0.5kb upstream 0.5kb upstream 500 false Chr01: 165498-165997 Phaseolus vulgaris
Phvul.001G002800 0.5kb downstream 0.5kb downstream 5219 true Chr01: 165998-171216 Phaseolus vulgaris
Phvul.001G002800 0.5kb downstream 0.5kb downstream 500 false Chr01: 170717-171216 Phaseolus vulgaris
Phvul.001G002800 1.0kb upstream 1.0kb upstream 5719 true Chr01: 164998-170716 Phaseolus vulgaris
Phvul.001G002800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 164998-165997 Phaseolus vulgaris
Phvul.001G002800 1.0kb downstream 1.0kb downstream 5719 true Chr01: 165998-171716 Phaseolus vulgaris
Phvul.001G002800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 170717-171716 Phaseolus vulgaris
Phvul.001G002800 2.0kb upstream 2.0kb upstream 6719 true Chr01: 163998-170716 Phaseolus vulgaris
Phvul.001G002800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 163998-165997 Phaseolus vulgaris
Phvul.001G002800 2.0kb downstream 2.0kb downstream 6719 true Chr01: 165998-172716 Phaseolus vulgaris
Phvul.001G002800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 170717-172716 Phaseolus vulgaris
Phvul.001G002800 5.0kb upstream 5.0kb upstream 9719 true Chr01: 160998-170716 Phaseolus vulgaris
Phvul.001G002800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 160998-165997 Phaseolus vulgaris
Phvul.001G002800 5.0kb downstream 5.0kb downstream 9719 true Chr01: 165998-175716 Phaseolus vulgaris
Phvul.001G002800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 170717-175716 Phaseolus vulgaris
Phvul.001G002800 10.0kb upstream 10.0kb upstream 14719 true Chr01: 155998-170716 Phaseolus vulgaris
Phvul.001G002800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 155998-165997 Phaseolus vulgaris
Phvul.001G002800 10.0kb downstream 10.0kb downstream 14719 true Chr01: 165998-180716 Phaseolus vulgaris
Phvul.001G002800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 170717-180716 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309011 5265 Fabidae View MSA
124061947 5270 Rosid View MSA
123745604 5271 Pentapetalae View MSA
122789832 5272 Eudicot View MSA
122048153 5273 Angiosperm View MSA
121310867 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.20149 0.0 17.5378    
cufflinks 4.77901 0.0 29.8232    
cufflinks 5.41955 0.0 38.9974    
cufflinks 4.55201 0.0 26.1686    
cufflinks 5.51751 0.0 29.3492    
cufflinks 6.32927 0.0 39.1496    
cufflinks 4.7617 0.0 27.9984    
cufflinks 1.11398 0.0 24.5935   Low
cufflinks 5.83682 0.0 28.1026    
cufflinks 1.86614 0.0 20.1317   Low
cufflinks 8.60047 0.0 37.2089   High

0 Strain