Gene : Phvul.001G105700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12385:SF51 - F20H23.27 PROTEIN-RELATED Genomic Order:  1035
Name:  ? Phvul.001G105700 Secondary Identifier:  ? PAC:37169120
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G105700 0.5kb upstream 0.5kb upstream 2970 true Chr01: 26153191-26156160 Phaseolus vulgaris
Phvul.001G105700 0.5kb upstream 0.5kb upstream 500 false Chr01: 26153191-26153690 Phaseolus vulgaris
Phvul.001G105700 0.5kb downstream 0.5kb downstream 2970 true Chr01: 26153691-26156660 Phaseolus vulgaris
Phvul.001G105700 0.5kb downstream 0.5kb downstream 500 false Chr01: 26156161-26156660 Phaseolus vulgaris
Phvul.001G105700 1.0kb upstream 1.0kb upstream 3470 true Chr01: 26152691-26156160 Phaseolus vulgaris
Phvul.001G105700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 26152691-26153690 Phaseolus vulgaris
Phvul.001G105700 1.0kb downstream 1.0kb downstream 3470 true Chr01: 26153691-26157160 Phaseolus vulgaris
Phvul.001G105700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 26156161-26157160 Phaseolus vulgaris
Phvul.001G105700 2.0kb upstream 2.0kb upstream 4470 true Chr01: 26151691-26156160 Phaseolus vulgaris
Phvul.001G105700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 26151691-26153690 Phaseolus vulgaris
Phvul.001G105700 2.0kb downstream 2.0kb downstream 4470 true Chr01: 26153691-26158160 Phaseolus vulgaris
Phvul.001G105700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 26156161-26158160 Phaseolus vulgaris
Phvul.001G105700 5.0kb upstream 5.0kb upstream 7470 true Chr01: 26148691-26156160 Phaseolus vulgaris
Phvul.001G105700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 26148691-26153690 Phaseolus vulgaris
Phvul.001G105700 5.0kb downstream 5.0kb downstream 7470 true Chr01: 26153691-26161160 Phaseolus vulgaris
Phvul.001G105700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 26156161-26161160 Phaseolus vulgaris
Phvul.001G105700 10.0kb upstream 10.0kb upstream 12470 true Chr01: 26143691-26156160 Phaseolus vulgaris
Phvul.001G105700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 26143691-26153690 Phaseolus vulgaris
Phvul.001G105700 10.0kb downstream 10.0kb downstream 12470 true Chr01: 26153691-26166160 Phaseolus vulgaris
Phvul.001G105700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 26156161-26166160 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306459 5265 Fabidae View MSA
124060474 5270 Rosid View MSA
123745461 5271 Pentapetalae View MSA
122789891 5272 Eudicot View MSA
122050147 5273 Angiosperm View MSA
121349087 5274 Embryophyte View MSA
123381160 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.37949 0.0 15.5143    
cufflinks 2.24425 0.0 11.0932    
cufflinks 0.573205 0.0 2.65517   Low
cufflinks 0.554676 0.0 3.35697 Low Low
cufflinks 4.93188 0.0 20.198    
cufflinks 1.5193 0.0 8.30776    
cufflinks 9.11771 0.0 31.7474   High
cufflinks 5.24581 0.0 19.864    
cufflinks 14.5102 0.0 46.2781   High
cufflinks 2.16003 0.0 11.0737    
cufflinks 5.50932 0.0 22.0884    

0 Strain