Gene : Phvul.001G108000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21237:SF27 - GRPE PROTEIN HOMOLOG Genomic Order:  1011
Name:  ? Phvul.001G108000 Secondary Identifier:  ? PAC:37170099
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G108000 0.5kb upstream 0.5kb upstream 6315 true Chr01: 22644330-22650644 Phaseolus vulgaris
Phvul.001G108000 0.5kb upstream 0.5kb upstream 500 false Chr01: 22644330-22644829 Phaseolus vulgaris
Phvul.001G108000 0.5kb downstream 0.5kb downstream 6315 true Chr01: 22644830-22651144 Phaseolus vulgaris
Phvul.001G108000 0.5kb downstream 0.5kb downstream 500 false Chr01: 22650645-22651144 Phaseolus vulgaris
Phvul.001G108000 1.0kb upstream 1.0kb upstream 6815 true Chr01: 22643830-22650644 Phaseolus vulgaris
Phvul.001G108000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 22643830-22644829 Phaseolus vulgaris
Phvul.001G108000 1.0kb downstream 1.0kb downstream 6815 true Chr01: 22644830-22651644 Phaseolus vulgaris
Phvul.001G108000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 22650645-22651644 Phaseolus vulgaris
Phvul.001G108000 2.0kb upstream 2.0kb upstream 7815 true Chr01: 22642830-22650644 Phaseolus vulgaris
Phvul.001G108000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 22642830-22644829 Phaseolus vulgaris
Phvul.001G108000 2.0kb downstream 2.0kb downstream 7815 true Chr01: 22644830-22652644 Phaseolus vulgaris
Phvul.001G108000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 22650645-22652644 Phaseolus vulgaris
Phvul.001G108000 5.0kb upstream 5.0kb upstream 10815 true Chr01: 22639830-22650644 Phaseolus vulgaris
Phvul.001G108000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 22639830-22644829 Phaseolus vulgaris
Phvul.001G108000 5.0kb downstream 5.0kb downstream 10815 true Chr01: 22644830-22655644 Phaseolus vulgaris
Phvul.001G108000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 22650645-22655644 Phaseolus vulgaris
Phvul.001G108000 10.0kb upstream 10.0kb upstream 15815 true Chr01: 22634830-22650644 Phaseolus vulgaris
Phvul.001G108000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 22634830-22644829 Phaseolus vulgaris
Phvul.001G108000 10.0kb downstream 10.0kb downstream 15815 true Chr01: 22644830-22660644 Phaseolus vulgaris
Phvul.001G108000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 22650645-22660644 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301683 5265 Fabidae View MSA
124068578 5270 Rosid View MSA
123741631 5271 Pentapetalae View MSA
122792081 5272 Eudicot View MSA
122048667 5273 Angiosperm View MSA
121346760 5274 Embryophyte View MSA
123427154 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.34 0.0 137.662 High  
cufflinks 38.9163 0.0 153.958 High  
cufflinks 111.883 0.0 460.897 High High
cufflinks 41.9166 0.0 156.565 High  
cufflinks 19.2847 0.0 72.9942    
cufflinks 46.8751 0.0 166.062 High  
cufflinks 9.34617 0.0 37.3131   Low
cufflinks 13.9076 0.0 51.2417    
cufflinks 10.4551 0.0 40.8816   Low
cufflinks 22.3102 0.0 77.507    
cufflinks 17.7112 0.0 67.7023    

0 Strain