Gene : Phvul.001G108900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR16201:SF34 - LYSOSOMAL AMINO ACID TRANSPORTER 1 Genomic Order:  1061
Name:  ? Phvul.001G108900 Secondary Identifier:  ? PAC:37170488
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G108900 0.5kb upstream 0.5kb upstream 7607 true Chr01: 28273814-28281420 Phaseolus vulgaris
Phvul.001G108900 0.5kb upstream 0.5kb upstream 500 false Chr01: 28273814-28274313 Phaseolus vulgaris
Phvul.001G108900 0.5kb downstream 0.5kb downstream 7607 true Chr01: 28274314-28281920 Phaseolus vulgaris
Phvul.001G108900 0.5kb downstream 0.5kb downstream 500 false Chr01: 28281421-28281920 Phaseolus vulgaris
Phvul.001G108900 1.0kb upstream 1.0kb upstream 8107 true Chr01: 28273314-28281420 Phaseolus vulgaris
Phvul.001G108900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 28273314-28274313 Phaseolus vulgaris
Phvul.001G108900 1.0kb downstream 1.0kb downstream 8107 true Chr01: 28274314-28282420 Phaseolus vulgaris
Phvul.001G108900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 28281421-28282420 Phaseolus vulgaris
Phvul.001G108900 2.0kb upstream 2.0kb upstream 9107 true Chr01: 28272314-28281420 Phaseolus vulgaris
Phvul.001G108900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 28272314-28274313 Phaseolus vulgaris
Phvul.001G108900 2.0kb downstream 2.0kb downstream 9107 true Chr01: 28274314-28283420 Phaseolus vulgaris
Phvul.001G108900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 28281421-28283420 Phaseolus vulgaris
Phvul.001G108900 5.0kb upstream 5.0kb upstream 12107 true Chr01: 28269314-28281420 Phaseolus vulgaris
Phvul.001G108900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 28269314-28274313 Phaseolus vulgaris
Phvul.001G108900 5.0kb downstream 5.0kb downstream 12107 true Chr01: 28274314-28286420 Phaseolus vulgaris
Phvul.001G108900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 28281421-28286420 Phaseolus vulgaris
Phvul.001G108900 10.0kb upstream 10.0kb upstream 17107 true Chr01: 28264314-28281420 Phaseolus vulgaris
Phvul.001G108900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 28264314-28274313 Phaseolus vulgaris
Phvul.001G108900 10.0kb downstream 10.0kb downstream 17107 true Chr01: 28274314-28291420 Phaseolus vulgaris
Phvul.001G108900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 28281421-28291420 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302043 5265 Fabidae View MSA
124071732 5270 Rosid View MSA
123744314 5271 Pentapetalae View MSA
122789645 5272 Eudicot View MSA
122043599 5273 Angiosperm View MSA
121344706 5274 Embryophyte View MSA
123427265 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.142351 0.0 0.590487 Low Low
cufflinks 0.178354 0.0 0.726698 Low Low
cufflinks 2.9844 0.0 9.27887    
cufflinks 0.139395 0.0 0.582605 Low Low
cufflinks 1.52283 0.0 5.17491    
cufflinks 1.26018 0.0 4.33973    
cufflinks 2.60672 0.0 8.29502    
cufflinks 5.67867 0.0 16.4249   High
cufflinks 4.42026 0.0 13.2751   High
cufflinks 0.409018 0.0 1.5616    
cufflinks 0.654259 0.0 2.41506    

0 Strain