Gene : Phvul.001G109000 P. vulgaris v2.1
Defline:  (1 of 1) PF03745 - Domain of unknown function (DUF309) (DUF309) Genomic Order:  1062
Name:  ? Phvul.001G109000 Secondary Identifier:  ? PAC:37170056
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G109000 0.5kb upstream 0.5kb upstream 3061 true Chr01: 28285478-28288538 Phaseolus vulgaris
Phvul.001G109000 0.5kb upstream 0.5kb upstream 500 false Chr01: 28288039-28288538 Phaseolus vulgaris
Phvul.001G109000 0.5kb downstream 0.5kb downstream 3061 true Chr01: 28284978-28288038 Phaseolus vulgaris
Phvul.001G109000 0.5kb downstream 0.5kb downstream 500 false Chr01: 28284978-28285477 Phaseolus vulgaris
Phvul.001G109000 1.0kb upstream 1.0kb upstream 3561 true Chr01: 28285478-28289038 Phaseolus vulgaris
Phvul.001G109000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 28288039-28289038 Phaseolus vulgaris
Phvul.001G109000 1.0kb downstream 1.0kb downstream 3561 true Chr01: 28284478-28288038 Phaseolus vulgaris
Phvul.001G109000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 28284478-28285477 Phaseolus vulgaris
Phvul.001G109000 2.0kb upstream 2.0kb upstream 4561 true Chr01: 28285478-28290038 Phaseolus vulgaris
Phvul.001G109000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 28288039-28290038 Phaseolus vulgaris
Phvul.001G109000 2.0kb downstream 2.0kb downstream 4561 true Chr01: 28283478-28288038 Phaseolus vulgaris
Phvul.001G109000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 28283478-28285477 Phaseolus vulgaris
Phvul.001G109000 5.0kb upstream 5.0kb upstream 7561 true Chr01: 28285478-28293038 Phaseolus vulgaris
Phvul.001G109000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 28288039-28293038 Phaseolus vulgaris
Phvul.001G109000 5.0kb downstream 5.0kb downstream 7561 true Chr01: 28280478-28288038 Phaseolus vulgaris
Phvul.001G109000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 28280478-28285477 Phaseolus vulgaris
Phvul.001G109000 10.0kb upstream 10.0kb upstream 12561 true Chr01: 28285478-28298038 Phaseolus vulgaris
Phvul.001G109000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 28288039-28298038 Phaseolus vulgaris
Phvul.001G109000 10.0kb downstream 10.0kb downstream 12561 true Chr01: 28275478-28288038 Phaseolus vulgaris
Phvul.001G109000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 28275478-28285477 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304295 5265 Fabidae View MSA
124061241 5270 Rosid View MSA
123740961 5271 Pentapetalae View MSA
122788122 5272 Eudicot View MSA
122046140 5273 Angiosperm View MSA
121347682 5274 Embryophyte View MSA
123380599 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.5278 0.0 74.6163    
cufflinks 3.25547 0.0 10.4485    
cufflinks 83.7199 0.0 220.423 High High
cufflinks 2.98571 0.0 9.70182    
cufflinks 2.44382 0.0 8.1827    
cufflinks 22.7523 0.0 60.1757    
cufflinks 0.0369296 0.0 0.180864 Low Low
cufflinks 0.026594 0.0 0.134652 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.09542 0.0 26.0782    
cufflinks 2.02717 0.0 6.91406    

0 Strain