Gene : Phvul.001G107200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10992:SF217 - HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN Genomic Order:  1003
Name:  ? Phvul.001G107200 Secondary Identifier:  ? PAC:37169304
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris LIPAS-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G107200 0.5kb upstream 0.5kb upstream 2815 true Chr01: 22397008-22399822 Phaseolus vulgaris
Phvul.001G107200 0.5kb upstream 0.5kb upstream 500 false Chr01: 22397008-22397507 Phaseolus vulgaris
Phvul.001G107200 0.5kb downstream 0.5kb downstream 2815 true Chr01: 22397508-22400322 Phaseolus vulgaris
Phvul.001G107200 0.5kb downstream 0.5kb downstream 500 false Chr01: 22399823-22400322 Phaseolus vulgaris
Phvul.001G107200 1.0kb upstream 1.0kb upstream 3315 true Chr01: 22396508-22399822 Phaseolus vulgaris
Phvul.001G107200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 22396508-22397507 Phaseolus vulgaris
Phvul.001G107200 1.0kb downstream 1.0kb downstream 3315 true Chr01: 22397508-22400822 Phaseolus vulgaris
Phvul.001G107200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 22399823-22400822 Phaseolus vulgaris
Phvul.001G107200 2.0kb upstream 2.0kb upstream 4315 true Chr01: 22395508-22399822 Phaseolus vulgaris
Phvul.001G107200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 22395508-22397507 Phaseolus vulgaris
Phvul.001G107200 2.0kb downstream 2.0kb downstream 4315 true Chr01: 22397508-22401822 Phaseolus vulgaris
Phvul.001G107200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 22399823-22401822 Phaseolus vulgaris
Phvul.001G107200 5.0kb upstream 5.0kb upstream 7315 true Chr01: 22392508-22399822 Phaseolus vulgaris
Phvul.001G107200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 22392508-22397507 Phaseolus vulgaris
Phvul.001G107200 5.0kb downstream 5.0kb downstream 7315 true Chr01: 22397508-22404822 Phaseolus vulgaris
Phvul.001G107200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 22399823-22404822 Phaseolus vulgaris
Phvul.001G107200 10.0kb upstream 10.0kb upstream 12315 true Chr01: 22387508-22399822 Phaseolus vulgaris
Phvul.001G107200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 22387508-22397507 Phaseolus vulgaris
Phvul.001G107200 10.0kb downstream 10.0kb downstream 12315 true Chr01: 22397508-22409822 Phaseolus vulgaris
Phvul.001G107200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 22399823-22409822 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301314 5265 Fabidae View MSA
124065025 5270 Rosid View MSA
123742866 5271 Pentapetalae View MSA
122790371 5272 Eudicot View MSA
122045603 5273 Angiosperm View MSA
121349939 5274 Embryophyte View MSA
123428460 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.29979 0.0 10.2791    
cufflinks 1.95001 0.0 6.44653    
cufflinks 6.733 0.0 19.2325   High
cufflinks 2.98594 0.0 9.5165    
cufflinks 1.3423 0.0 4.65452    
cufflinks 5.87827 0.0 17.1168   High
cufflinks 0.202116 0.0 0.820664 Low Low
cufflinks 0.101706 0.0 0.435979 Low Low
cufflinks 0.38965 0.0 1.50792 Low  
cufflinks 2.80674 0.0 8.92181    
cufflinks 2.70937 0.0 8.67485    

0 Strain