Gene : Phvul.001G110300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11909:SF131 - CASEIN KINASE-LIKE PROTEIN-RELATED Genomic Order:  1075
Name:  ? Phvul.001G110300 Secondary Identifier:  ? PAC:37170649
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G110300 0.5kb upstream 0.5kb upstream 7657 true Chr01: 28915606-28923262 Phaseolus vulgaris
Phvul.001G110300 0.5kb upstream 0.5kb upstream 500 false Chr01: 28915606-28916105 Phaseolus vulgaris
Phvul.001G110300 0.5kb downstream 0.5kb downstream 7657 true Chr01: 28916106-28923762 Phaseolus vulgaris
Phvul.001G110300 0.5kb downstream 0.5kb downstream 500 false Chr01: 28923263-28923762 Phaseolus vulgaris
Phvul.001G110300 1.0kb upstream 1.0kb upstream 8157 true Chr01: 28915106-28923262 Phaseolus vulgaris
Phvul.001G110300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 28915106-28916105 Phaseolus vulgaris
Phvul.001G110300 1.0kb downstream 1.0kb downstream 8157 true Chr01: 28916106-28924262 Phaseolus vulgaris
Phvul.001G110300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 28923263-28924262 Phaseolus vulgaris
Phvul.001G110300 2.0kb upstream 2.0kb upstream 9157 true Chr01: 28914106-28923262 Phaseolus vulgaris
Phvul.001G110300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 28914106-28916105 Phaseolus vulgaris
Phvul.001G110300 2.0kb downstream 2.0kb downstream 9157 true Chr01: 28916106-28925262 Phaseolus vulgaris
Phvul.001G110300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 28923263-28925262 Phaseolus vulgaris
Phvul.001G110300 5.0kb upstream 5.0kb upstream 12157 true Chr01: 28911106-28923262 Phaseolus vulgaris
Phvul.001G110300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 28911106-28916105 Phaseolus vulgaris
Phvul.001G110300 5.0kb downstream 5.0kb downstream 12157 true Chr01: 28916106-28928262 Phaseolus vulgaris
Phvul.001G110300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 28923263-28928262 Phaseolus vulgaris
Phvul.001G110300 10.0kb upstream 10.0kb upstream 17157 true Chr01: 28906106-28923262 Phaseolus vulgaris
Phvul.001G110300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 28906106-28916105 Phaseolus vulgaris
Phvul.001G110300 10.0kb downstream 10.0kb downstream 17157 true Chr01: 28916106-28933262 Phaseolus vulgaris
Phvul.001G110300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 28923263-28933262 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041344 5273 Angiosperm View MSA
122308851 5265 Fabidae View MSA
124066133 5270 Rosid View MSA
123749294 5271 Pentapetalae View MSA
122796598 5272 Eudicot View MSA
121309833 5274 Embryophyte View MSA
123427857 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.9474 0.0 161.167 High  
cufflinks 46.5792 0.0 128.917 High Low
cufflinks 62.9396 0.0 180.507 High  
cufflinks 45.7915 0.0 125.611 High Low
cufflinks 73.4831 0.0 213.242 High High
cufflinks 53.5113 0.0 150.507 High  
cufflinks 63.7 0.0 183.0 High  
cufflinks 51.5882 0.0 144.974 High  
cufflinks 71.1942 0.0 206.608 High  
cufflinks 64.8795 0.0 186.171 High  
cufflinks 80.0052 0.0 235.351 High High

0 Strain