Gene : Phvul.001G110500 P. vulgaris v2.1
Defline:  (1 of 2) 1.4.1.2 - Glutamate dehydrogenase / Glutamic dehydrogenase Genomic Order:  1077
Name:  ? Phvul.001G110500 Secondary Identifier:  ? PAC:37168230
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris GLUTAMATE-DEG1-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G110500 0.5kb upstream 0.5kb upstream 6624 true Chr01: 28955524-28962147 Phaseolus vulgaris
Phvul.001G110500 0.5kb upstream 0.5kb upstream 500 false Chr01: 28961648-28962147 Phaseolus vulgaris
Phvul.001G110500 0.5kb downstream 0.5kb downstream 6624 true Chr01: 28955024-28961647 Phaseolus vulgaris
Phvul.001G110500 0.5kb downstream 0.5kb downstream 500 false Chr01: 28955024-28955523 Phaseolus vulgaris
Phvul.001G110500 1.0kb upstream 1.0kb upstream 7124 true Chr01: 28955524-28962647 Phaseolus vulgaris
Phvul.001G110500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 28961648-28962647 Phaseolus vulgaris
Phvul.001G110500 1.0kb downstream 1.0kb downstream 7124 true Chr01: 28954524-28961647 Phaseolus vulgaris
Phvul.001G110500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 28954524-28955523 Phaseolus vulgaris
Phvul.001G110500 2.0kb upstream 2.0kb upstream 8124 true Chr01: 28955524-28963647 Phaseolus vulgaris
Phvul.001G110500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 28961648-28963647 Phaseolus vulgaris
Phvul.001G110500 2.0kb downstream 2.0kb downstream 8124 true Chr01: 28953524-28961647 Phaseolus vulgaris
Phvul.001G110500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 28953524-28955523 Phaseolus vulgaris
Phvul.001G110500 5.0kb upstream 5.0kb upstream 11124 true Chr01: 28955524-28966647 Phaseolus vulgaris
Phvul.001G110500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 28961648-28966647 Phaseolus vulgaris
Phvul.001G110500 5.0kb downstream 5.0kb downstream 11124 true Chr01: 28950524-28961647 Phaseolus vulgaris
Phvul.001G110500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 28950524-28955523 Phaseolus vulgaris
Phvul.001G110500 10.0kb upstream 10.0kb upstream 16124 true Chr01: 28955524-28971647 Phaseolus vulgaris
Phvul.001G110500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 28961648-28971647 Phaseolus vulgaris
Phvul.001G110500 10.0kb downstream 10.0kb downstream 16124 true Chr01: 28945524-28961647 Phaseolus vulgaris
Phvul.001G110500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 28945524-28955523 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313991 5265 Fabidae View MSA
124067187 5270 Rosid View MSA
123747810 5271 Pentapetalae View MSA
122788460 5272 Eudicot View MSA
122043764 5273 Angiosperm View MSA
121350758 5274 Embryophyte View MSA
123427828 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 204.842 0.0 877.655 High High
cufflinks 50.3704 0.0 151.841 High  
cufflinks 23.132 0.0 68.6717   Low
cufflinks 62.5758 0.0 182.628 High  
cufflinks 32.9812 0.0 110.295 High  
cufflinks 19.3555 0.0 56.6797   Low
cufflinks 34.8502 0.0 111.121 High  
cufflinks 62.157 0.0 210.662 High  
cufflinks 35.2266 0.0 109.943 High  
cufflinks 40.9643 0.0 120.721 High  
cufflinks 39.0557 0.0 126.267 High  

0 Strain