Gene : Phvul.001G113200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22870:SF175 - ANKYRIN REPEAT AND REGULATOR OF CHROMOSOME CONDENSATION (RCC1) DOMAIN-CONTAINING PROTEIN Genomic Order:  1150
Name:  ? Phvul.001G113200 Secondary Identifier:  ? PAC:37169560
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G113200 0.5kb upstream 0.5kb upstream 10586 true Chr01: 31550587-31561172 Phaseolus vulgaris
Phvul.001G113200 0.5kb upstream 0.5kb upstream 500 false Chr01: 31550587-31551086 Phaseolus vulgaris
Phvul.001G113200 0.5kb downstream 0.5kb downstream 10586 true Chr01: 31551087-31561672 Phaseolus vulgaris
Phvul.001G113200 0.5kb downstream 0.5kb downstream 500 false Chr01: 31561173-31561672 Phaseolus vulgaris
Phvul.001G113200 1.0kb upstream 1.0kb upstream 11086 true Chr01: 31550087-31561172 Phaseolus vulgaris
Phvul.001G113200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 31550087-31551086 Phaseolus vulgaris
Phvul.001G113200 1.0kb downstream 1.0kb downstream 11086 true Chr01: 31551087-31562172 Phaseolus vulgaris
Phvul.001G113200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 31561173-31562172 Phaseolus vulgaris
Phvul.001G113200 2.0kb upstream 2.0kb upstream 12086 true Chr01: 31549087-31561172 Phaseolus vulgaris
Phvul.001G113200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 31549087-31551086 Phaseolus vulgaris
Phvul.001G113200 2.0kb downstream 2.0kb downstream 12086 true Chr01: 31551087-31563172 Phaseolus vulgaris
Phvul.001G113200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 31561173-31563172 Phaseolus vulgaris
Phvul.001G113200 5.0kb upstream 5.0kb upstream 15086 true Chr01: 31546087-31561172 Phaseolus vulgaris
Phvul.001G113200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 31546087-31551086 Phaseolus vulgaris
Phvul.001G113200 5.0kb downstream 5.0kb downstream 15086 true Chr01: 31551087-31566172 Phaseolus vulgaris
Phvul.001G113200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 31561173-31566172 Phaseolus vulgaris
Phvul.001G113200 10.0kb upstream 10.0kb upstream 20086 true Chr01: 31541087-31561172 Phaseolus vulgaris
Phvul.001G113200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 31541087-31551086 Phaseolus vulgaris
Phvul.001G113200 10.0kb downstream 10.0kb downstream 20086 true Chr01: 31551087-31571172 Phaseolus vulgaris
Phvul.001G113200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 31561173-31571172 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301338 5265 Fabidae View MSA
124061944 5270 Rosid View MSA
123736437 5271 Pentapetalae View MSA
122786793 5272 Eudicot View MSA
122044253 5273 Angiosperm View MSA
121345534 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.34252 0.0 14.531   Low
cufflinks 10.1003 0.0 32.1404    
cufflinks 10.9475 0.0 34.9901    
cufflinks 4.4776 0.0 15.195   Low
cufflinks 10.0237 0.0 31.8493    
cufflinks 20.4102 0.0 70.1192   High
cufflinks 10.8616 0.0 34.6868    
cufflinks 12.2009 0.0 39.3918    
cufflinks 10.9812 0.0 35.0209    
cufflinks 13.1788 0.0 42.5554    
cufflinks 11.0491 0.0 35.2153    

0 Strain