Gene : Phvul.001G113400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10926//PTHR10926:SF28 - CELL CYCLE CONTROL PROTEIN 50 // SUBFAMILY NOT NAMED Genomic Order:  1148
Name:  ? Phvul.001G113400 Secondary Identifier:  ? PAC:37170716
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G113400 0.5kb upstream 0.5kb upstream 3893 true Chr01: 31473155-31477047 Phaseolus vulgaris
Phvul.001G113400 0.5kb upstream 0.5kb upstream 500 false Chr01: 31473155-31473654 Phaseolus vulgaris
Phvul.001G113400 0.5kb downstream 0.5kb downstream 3893 true Chr01: 31473655-31477547 Phaseolus vulgaris
Phvul.001G113400 0.5kb downstream 0.5kb downstream 500 false Chr01: 31477048-31477547 Phaseolus vulgaris
Phvul.001G113400 1.0kb upstream 1.0kb upstream 4393 true Chr01: 31472655-31477047 Phaseolus vulgaris
Phvul.001G113400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 31472655-31473654 Phaseolus vulgaris
Phvul.001G113400 1.0kb downstream 1.0kb downstream 4393 true Chr01: 31473655-31478047 Phaseolus vulgaris
Phvul.001G113400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 31477048-31478047 Phaseolus vulgaris
Phvul.001G113400 2.0kb upstream 2.0kb upstream 5393 true Chr01: 31471655-31477047 Phaseolus vulgaris
Phvul.001G113400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 31471655-31473654 Phaseolus vulgaris
Phvul.001G113400 2.0kb downstream 2.0kb downstream 5393 true Chr01: 31473655-31479047 Phaseolus vulgaris
Phvul.001G113400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 31477048-31479047 Phaseolus vulgaris
Phvul.001G113400 5.0kb upstream 5.0kb upstream 8393 true Chr01: 31468655-31477047 Phaseolus vulgaris
Phvul.001G113400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 31468655-31473654 Phaseolus vulgaris
Phvul.001G113400 5.0kb downstream 5.0kb downstream 8393 true Chr01: 31473655-31482047 Phaseolus vulgaris
Phvul.001G113400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 31477048-31482047 Phaseolus vulgaris
Phvul.001G113400 10.0kb upstream 10.0kb upstream 13393 true Chr01: 31463655-31477047 Phaseolus vulgaris
Phvul.001G113400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 31463655-31473654 Phaseolus vulgaris
Phvul.001G113400 10.0kb downstream 10.0kb downstream 13393 true Chr01: 31473655-31487047 Phaseolus vulgaris
Phvul.001G113400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 31477048-31487047 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314219 5265 Fabidae View MSA
124071638 5270 Rosid View MSA
123747358 5271 Pentapetalae View MSA
122796482 5272 Eudicot View MSA
122050302 5273 Angiosperm View MSA
121349346 5274 Embryophyte View MSA
123425782 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.1799 0.0 5.15045   High
cufflinks 0.567968 0.0 3.78993    
cufflinks 0.238321 0.0 0.962157 Low  
cufflinks 1.46798 0.0 8.05728   High
cufflinks 0.106138 0.0 0.478757 Low  
cufflinks 0.463492 0.0 2.2008 Low  
cufflinks 0.0974414 0.0 0.43529 Low Low
cufflinks 0.895557 0.0 5.28323   High
cufflinks 0.107065 0.0 0.471388 Low  
cufflinks 0.0736394 0.0 0.337266 Low Low
cufflinks 0.206841 0.0 0.8485 Low  

0 Strain