Gene : Phvul.001G111900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10527//PTHR10527:SF29 - IMPORTIN BETA // SUBFAMILY NOT NAMED Genomic Order:  1160
Name:  ? Phvul.001G111900 Secondary Identifier:  ? PAC:37170189
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G111900 0.5kb upstream 0.5kb upstream 11530 true Chr01: 32432176-32443705 Phaseolus vulgaris
Phvul.001G111900 0.5kb upstream 0.5kb upstream 500 false Chr01: 32432176-32432675 Phaseolus vulgaris
Phvul.001G111900 0.5kb downstream 0.5kb downstream 11530 true Chr01: 32432676-32444205 Phaseolus vulgaris
Phvul.001G111900 0.5kb downstream 0.5kb downstream 500 false Chr01: 32443706-32444205 Phaseolus vulgaris
Phvul.001G111900 1.0kb upstream 1.0kb upstream 12030 true Chr01: 32431676-32443705 Phaseolus vulgaris
Phvul.001G111900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 32431676-32432675 Phaseolus vulgaris
Phvul.001G111900 1.0kb downstream 1.0kb downstream 12030 true Chr01: 32432676-32444705 Phaseolus vulgaris
Phvul.001G111900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 32443706-32444705 Phaseolus vulgaris
Phvul.001G111900 2.0kb upstream 2.0kb upstream 13030 true Chr01: 32430676-32443705 Phaseolus vulgaris
Phvul.001G111900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 32430676-32432675 Phaseolus vulgaris
Phvul.001G111900 2.0kb downstream 2.0kb downstream 13030 true Chr01: 32432676-32445705 Phaseolus vulgaris
Phvul.001G111900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 32443706-32445705 Phaseolus vulgaris
Phvul.001G111900 5.0kb upstream 5.0kb upstream 16030 true Chr01: 32427676-32443705 Phaseolus vulgaris
Phvul.001G111900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 32427676-32432675 Phaseolus vulgaris
Phvul.001G111900 5.0kb downstream 5.0kb downstream 16030 true Chr01: 32432676-32448705 Phaseolus vulgaris
Phvul.001G111900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 32443706-32448705 Phaseolus vulgaris
Phvul.001G111900 10.0kb upstream 10.0kb upstream 21030 true Chr01: 32422676-32443705 Phaseolus vulgaris
Phvul.001G111900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 32422676-32432675 Phaseolus vulgaris
Phvul.001G111900 10.0kb downstream 10.0kb downstream 21030 true Chr01: 32432676-32453705 Phaseolus vulgaris
Phvul.001G111900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 32443706-32453705 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302052 5265 Fabidae View MSA
124071324 5270 Rosid View MSA
123743954 5271 Pentapetalae View MSA
122786465 5272 Eudicot View MSA
122043271 5273 Angiosperm View MSA
121344814 5274 Embryophyte View MSA
123426355 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.52303 0.0 22.0631   Low
cufflinks 16.9368 0.0 44.2985    
cufflinks 25.6885 0.0 69.168    
cufflinks 6.80921 0.0 17.7205   Low
cufflinks 18.241 0.0 47.9663    
cufflinks 18.9212 0.0 49.778    
cufflinks 21.4054 0.0 56.931    
cufflinks 20.247 0.0 53.4982    
cufflinks 24.8515 0.0 66.7868    
cufflinks 26.4295 0.0 71.3025    
cufflinks 15.1221 0.0 39.3786    

0 Strain