Gene : Phvul.001G098000 P. vulgaris v2.1
Defline:  (1 of 3) K11805 - WD repeat-containing protein 68 (WDR68, HAN11) Genomic Order:  952
Name:  ? Phvul.001G098000 Secondary Identifier:  ? PAC:37170055
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G098000 0.5kb upstream 0.5kb upstream 2437 true Chr01: 18875069-18877505 Phaseolus vulgaris
Phvul.001G098000 0.5kb upstream 0.5kb upstream 500 false Chr01: 18875069-18875568 Phaseolus vulgaris
Phvul.001G098000 0.5kb downstream 0.5kb downstream 2437 true Chr01: 18875569-18878005 Phaseolus vulgaris
Phvul.001G098000 0.5kb downstream 0.5kb downstream 500 false Chr01: 18877506-18878005 Phaseolus vulgaris
Phvul.001G098000 1.0kb upstream 1.0kb upstream 2937 true Chr01: 18874569-18877505 Phaseolus vulgaris
Phvul.001G098000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 18874569-18875568 Phaseolus vulgaris
Phvul.001G098000 1.0kb downstream 1.0kb downstream 2937 true Chr01: 18875569-18878505 Phaseolus vulgaris
Phvul.001G098000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 18877506-18878505 Phaseolus vulgaris
Phvul.001G098000 2.0kb upstream 2.0kb upstream 3937 true Chr01: 18873569-18877505 Phaseolus vulgaris
Phvul.001G098000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 18873569-18875568 Phaseolus vulgaris
Phvul.001G098000 2.0kb downstream 2.0kb downstream 3937 true Chr01: 18875569-18879505 Phaseolus vulgaris
Phvul.001G098000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 18877506-18879505 Phaseolus vulgaris
Phvul.001G098000 5.0kb upstream 5.0kb upstream 6937 true Chr01: 18870569-18877505 Phaseolus vulgaris
Phvul.001G098000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 18870569-18875568 Phaseolus vulgaris
Phvul.001G098000 5.0kb downstream 5.0kb downstream 6937 true Chr01: 18875569-18882505 Phaseolus vulgaris
Phvul.001G098000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 18877506-18882505 Phaseolus vulgaris
Phvul.001G098000 10.0kb upstream 10.0kb upstream 11937 true Chr01: 18865569-18877505 Phaseolus vulgaris
Phvul.001G098000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 18865569-18875568 Phaseolus vulgaris
Phvul.001G098000 10.0kb downstream 10.0kb downstream 11937 true Chr01: 18875569-18887505 Phaseolus vulgaris
Phvul.001G098000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 18877506-18887505 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306354 5265 Fabidae View MSA
124065960 5270 Rosid View MSA
123745660 5271 Pentapetalae View MSA
122791660 5272 Eudicot View MSA
122050418 5273 Angiosperm View MSA
121348109 5274 Embryophyte View MSA
123423806 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.8725 0.0 85.4545    
cufflinks 49.425 0.0 131.029 High  
cufflinks 32.7465 0.0 84.9064    
cufflinks 38.6008 0.0 101.368 High  
cufflinks 52.8224 0.0 141.791 High  
cufflinks 41.4962 0.0 108.735 High  
cufflinks 20.967 0.0 54.2015   Low
cufflinks 16.6111 0.0 43.1804   Low
cufflinks 36.37 0.0 95.0344 High  
cufflinks 63.8245 0.0 173.03 High High
cufflinks 53.0109 0.0 141.977 High  

0 Strain