Gene : Phvul.001G098100 P. vulgaris v2.1
Defline:  (1 of 1) 1.2.1.12//1.2.1.13 - Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) / Triosephosphate dehydrogenase // Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) / Triosephosphate dehydrogenase (NADP+) Genomic Order:  953
Name:  ? Phvul.001G098100 Secondary Identifier:  ? PAC:37169134
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ANAEROFRUCAT-PWY Phaseolus vulgaris pathologic  
Pvulgaris ANAGLYCOLYSIS-PWY Phaseolus vulgaris pathologic  
Pvulgaris CALVIN-PWY Phaseolus vulgaris pathologic  
Pvulgaris GLUCONEO-PWY Phaseolus vulgaris pathologic  
Pvulgaris PHOTOALL-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-1042 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5464 Phaseolus vulgaris pathologic  
Pvulgaris SUCSYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G098100 0.5kb upstream 0.5kb upstream 3600 true Chr01: 18906822-18910421 Phaseolus vulgaris
Phvul.001G098100 0.5kb upstream 0.5kb upstream 500 false Chr01: 18906822-18907321 Phaseolus vulgaris
Phvul.001G098100 0.5kb downstream 0.5kb downstream 3600 true Chr01: 18907322-18910921 Phaseolus vulgaris
Phvul.001G098100 0.5kb downstream 0.5kb downstream 500 false Chr01: 18910422-18910921 Phaseolus vulgaris
Phvul.001G098100 1.0kb upstream 1.0kb upstream 4100 true Chr01: 18906322-18910421 Phaseolus vulgaris
Phvul.001G098100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 18906322-18907321 Phaseolus vulgaris
Phvul.001G098100 1.0kb downstream 1.0kb downstream 4100 true Chr01: 18907322-18911421 Phaseolus vulgaris
Phvul.001G098100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 18910422-18911421 Phaseolus vulgaris
Phvul.001G098100 2.0kb upstream 2.0kb upstream 5100 true Chr01: 18905322-18910421 Phaseolus vulgaris
Phvul.001G098100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 18905322-18907321 Phaseolus vulgaris
Phvul.001G098100 2.0kb downstream 2.0kb downstream 5100 true Chr01: 18907322-18912421 Phaseolus vulgaris
Phvul.001G098100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 18910422-18912421 Phaseolus vulgaris
Phvul.001G098100 5.0kb upstream 5.0kb upstream 8100 true Chr01: 18902322-18910421 Phaseolus vulgaris
Phvul.001G098100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 18902322-18907321 Phaseolus vulgaris
Phvul.001G098100 5.0kb downstream 5.0kb downstream 8100 true Chr01: 18907322-18915421 Phaseolus vulgaris
Phvul.001G098100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 18910422-18915421 Phaseolus vulgaris
Phvul.001G098100 10.0kb upstream 10.0kb upstream 13100 true Chr01: 18897322-18910421 Phaseolus vulgaris
Phvul.001G098100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 18897322-18907321 Phaseolus vulgaris
Phvul.001G098100 10.0kb downstream 10.0kb downstream 13100 true Chr01: 18907322-18920421 Phaseolus vulgaris
Phvul.001G098100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 18910422-18920421 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303668 5265 Fabidae View MSA
124061607 5270 Rosid View MSA
123737488 5271 Pentapetalae View MSA
122795007 5272 Eudicot View MSA
122045489 5273 Angiosperm View MSA
121346351 5274 Embryophyte View MSA
123425156 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 103.46 0.0 290.122 High  
cufflinks 272.032 0.0 882.872 High  
cufflinks 6239.35 0.0 51777.6 High High
cufflinks 194.273 0.0 590.829 High  
cufflinks 241.203 0.0 760.87 High  
cufflinks 1316.62 0.0 6365.6 High  
cufflinks 0.207026 0.0 0.817407 Low Low
cufflinks 0.062897 0.0 0.275406 Low Low
cufflinks 0.466923 0.0 1.72671 Low Low
cufflinks 289.15 0.0 943.877 High  
cufflinks 134.293 0.0 388.316 High  

0 Strain