Gene : Phvul.001G098300 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31062:SF15 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 4-RELATED Genomic Order:  955
Name:  ? Phvul.001G098300 Secondary Identifier:  ? PAC:37168293
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G098300 0.5kb upstream 0.5kb upstream 2058 true Chr01: 18931313-18933370 Phaseolus vulgaris
Phvul.001G098300 0.5kb upstream 0.5kb upstream 500 false Chr01: 18932871-18933370 Phaseolus vulgaris
Phvul.001G098300 0.5kb downstream 0.5kb downstream 2058 true Chr01: 18930813-18932870 Phaseolus vulgaris
Phvul.001G098300 0.5kb downstream 0.5kb downstream 500 false Chr01: 18930813-18931312 Phaseolus vulgaris
Phvul.001G098300 1.0kb upstream 1.0kb upstream 2558 true Chr01: 18931313-18933870 Phaseolus vulgaris
Phvul.001G098300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 18932871-18933870 Phaseolus vulgaris
Phvul.001G098300 1.0kb downstream 1.0kb downstream 2558 true Chr01: 18930313-18932870 Phaseolus vulgaris
Phvul.001G098300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 18930313-18931312 Phaseolus vulgaris
Phvul.001G098300 2.0kb upstream 2.0kb upstream 3558 true Chr01: 18931313-18934870 Phaseolus vulgaris
Phvul.001G098300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 18932871-18934870 Phaseolus vulgaris
Phvul.001G098300 2.0kb downstream 2.0kb downstream 3558 true Chr01: 18929313-18932870 Phaseolus vulgaris
Phvul.001G098300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 18929313-18931312 Phaseolus vulgaris
Phvul.001G098300 5.0kb upstream 5.0kb upstream 6558 true Chr01: 18931313-18937870 Phaseolus vulgaris
Phvul.001G098300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 18932871-18937870 Phaseolus vulgaris
Phvul.001G098300 5.0kb downstream 5.0kb downstream 6558 true Chr01: 18926313-18932870 Phaseolus vulgaris
Phvul.001G098300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 18926313-18931312 Phaseolus vulgaris
Phvul.001G098300 10.0kb upstream 10.0kb upstream 11558 true Chr01: 18931313-18942870 Phaseolus vulgaris
Phvul.001G098300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 18932871-18942870 Phaseolus vulgaris
Phvul.001G098300 10.0kb downstream 10.0kb downstream 11558 true Chr01: 18921313-18932870 Phaseolus vulgaris
Phvul.001G098300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 18921313-18931312 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310000 5265 Fabidae View MSA
124063834 5270 Rosid View MSA
123740091 5271 Pentapetalae View MSA
122795119 5272 Eudicot View MSA
122042139 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 138.877 0.0 386.759 High High
cufflinks 0.209023 0.0 0.851657 Low Low
cufflinks 1.06497 0.0 3.79308    
cufflinks 527.803 0.0 1799.65 High High
cufflinks 17.8576 0.0 47.5881    
cufflinks 0.216965 0.0 0.881689 Low Low
cufflinks 6.68885 0.0 19.3267    
cufflinks 3.82849 0.0 11.8059    
cufflinks 45.5278 0.0 117.893 High  
cufflinks 2.52578 0.0 8.19303    
cufflinks 22.0361 0.0 57.8383    

0 Strain