Gene : Phvul.001G099000 P. vulgaris v2.1
Defline:  (1 of 2) K15340 - DNA cross-link repair 1A protein (DCLRE1A, SNM1A, PSO2) Genomic Order:  962
Name:  ? Phvul.001G099000 Secondary Identifier:  ? PAC:37168414
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G099000 0.5kb upstream 0.5kb upstream 12991 true Chr01: 19218665-19231655 Phaseolus vulgaris
Phvul.001G099000 0.5kb upstream 0.5kb upstream 500 false Chr01: 19218665-19219164 Phaseolus vulgaris
Phvul.001G099000 0.5kb downstream 0.5kb downstream 12991 true Chr01: 19219165-19232155 Phaseolus vulgaris
Phvul.001G099000 0.5kb downstream 0.5kb downstream 500 false Chr01: 19231656-19232155 Phaseolus vulgaris
Phvul.001G099000 1.0kb upstream 1.0kb upstream 13491 true Chr01: 19218165-19231655 Phaseolus vulgaris
Phvul.001G099000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 19218165-19219164 Phaseolus vulgaris
Phvul.001G099000 1.0kb downstream 1.0kb downstream 13491 true Chr01: 19219165-19232655 Phaseolus vulgaris
Phvul.001G099000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 19231656-19232655 Phaseolus vulgaris
Phvul.001G099000 2.0kb upstream 2.0kb upstream 14491 true Chr01: 19217165-19231655 Phaseolus vulgaris
Phvul.001G099000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 19217165-19219164 Phaseolus vulgaris
Phvul.001G099000 2.0kb downstream 2.0kb downstream 14491 true Chr01: 19219165-19233655 Phaseolus vulgaris
Phvul.001G099000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 19231656-19233655 Phaseolus vulgaris
Phvul.001G099000 5.0kb upstream 5.0kb upstream 17491 true Chr01: 19214165-19231655 Phaseolus vulgaris
Phvul.001G099000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 19214165-19219164 Phaseolus vulgaris
Phvul.001G099000 5.0kb downstream 5.0kb downstream 17491 true Chr01: 19219165-19236655 Phaseolus vulgaris
Phvul.001G099000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 19231656-19236655 Phaseolus vulgaris
Phvul.001G099000 10.0kb upstream 10.0kb upstream 22491 true Chr01: 19209165-19231655 Phaseolus vulgaris
Phvul.001G099000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 19209165-19219164 Phaseolus vulgaris
Phvul.001G099000 10.0kb downstream 10.0kb downstream 22491 true Chr01: 19219165-19241655 Phaseolus vulgaris
Phvul.001G099000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 19231656-19241655 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296613 5265 Fabidae View MSA
124073622 5270 Rosid View MSA
123741645 5271 Pentapetalae View MSA
122793173 5272 Eudicot View MSA
122046861 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.29717 0.0 15.3892   High
cufflinks 1.94635 0.0 6.36527    
cufflinks 1.99531 0.0 6.50758    
cufflinks 2.10108 0.0 6.8273    
cufflinks 1.01484 0.0 3.58704   Low
cufflinks 2.50845 0.0 7.97464    
cufflinks 2.19455 0.0 7.08036    
cufflinks 1.61952 0.0 5.39863    
cufflinks 2.61114 0.0 8.27917    
cufflinks 1.62777 0.0 5.43337    
cufflinks 0.862028 0.0 3.09027   Low

0 Strain