Gene : Phvul.001G099200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR16007//PTHR16007:SF13 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED // SUBFAMILY NOT NAMED Genomic Order:  963
Name:  ? Phvul.001G099200 Secondary Identifier:  ? PAC:37170962
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G099200 0.5kb upstream 0.5kb upstream 1790 true Chr01: 19292481-19294270 Phaseolus vulgaris
Phvul.001G099200 0.5kb upstream 0.5kb upstream 500 false Chr01: 19293771-19294270 Phaseolus vulgaris
Phvul.001G099200 0.5kb downstream 0.5kb downstream 1790 true Chr01: 19291981-19293770 Phaseolus vulgaris
Phvul.001G099200 0.5kb downstream 0.5kb downstream 500 false Chr01: 19291981-19292480 Phaseolus vulgaris
Phvul.001G099200 1.0kb upstream 1.0kb upstream 2290 true Chr01: 19292481-19294770 Phaseolus vulgaris
Phvul.001G099200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 19293771-19294770 Phaseolus vulgaris
Phvul.001G099200 1.0kb downstream 1.0kb downstream 2290 true Chr01: 19291481-19293770 Phaseolus vulgaris
Phvul.001G099200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 19291481-19292480 Phaseolus vulgaris
Phvul.001G099200 2.0kb upstream 2.0kb upstream 3290 true Chr01: 19292481-19295770 Phaseolus vulgaris
Phvul.001G099200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 19293771-19295770 Phaseolus vulgaris
Phvul.001G099200 2.0kb downstream 2.0kb downstream 3290 true Chr01: 19290481-19293770 Phaseolus vulgaris
Phvul.001G099200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 19290481-19292480 Phaseolus vulgaris
Phvul.001G099200 5.0kb upstream 5.0kb upstream 6290 true Chr01: 19292481-19298770 Phaseolus vulgaris
Phvul.001G099200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 19293771-19298770 Phaseolus vulgaris
Phvul.001G099200 5.0kb downstream 5.0kb downstream 6290 true Chr01: 19287481-19293770 Phaseolus vulgaris
Phvul.001G099200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 19287481-19292480 Phaseolus vulgaris
Phvul.001G099200 10.0kb upstream 10.0kb upstream 11290 true Chr01: 19292481-19303770 Phaseolus vulgaris
Phvul.001G099200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 19293771-19303770 Phaseolus vulgaris
Phvul.001G099200 10.0kb downstream 10.0kb downstream 11290 true Chr01: 19282481-19293770 Phaseolus vulgaris
Phvul.001G099200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 19282481-19292480 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041247 5273 Angiosperm View MSA
122307294 5265 Fabidae View MSA
124063633 5270 Rosid View MSA
123742298 5271 Pentapetalae View MSA
122794517 5272 Eudicot View MSA
121344205 5274 Embryophyte View MSA
123380001 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.1885 0.0 36.3845   Low
cufflinks 28.0301 0.0 73.1365    
cufflinks 9.03775 0.0 25.8491   Low
cufflinks 29.313 0.0 75.9035    
cufflinks 19.7661 0.0 52.0911    
cufflinks 19.0678 0.0 50.9167    
cufflinks 20.6325 0.0 54.3484    
cufflinks 17.6802 0.0 47.5207    
cufflinks 31.7 0.0 82.1601 High High
cufflinks 22.299 0.0 58.8403    
cufflinks 25.1723 0.0 65.6674    

0 Strain