Gene : Phvul.001G100200 P. vulgaris v2.1
Defline:  (1 of 91) PF02365 - No apical meristem (NAM) protein (NAM) Genomic Order:  972
Name:  ? Phvul.001G100200 Secondary Identifier:  ? PAC:37171224
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G100200 0.5kb upstream 0.5kb upstream 2653 true Chr01: 20330286-20332938 Phaseolus vulgaris
Phvul.001G100200 0.5kb upstream 0.5kb upstream 500 false Chr01: 20330286-20330785 Phaseolus vulgaris
Phvul.001G100200 0.5kb downstream 0.5kb downstream 2653 true Chr01: 20330786-20333438 Phaseolus vulgaris
Phvul.001G100200 0.5kb downstream 0.5kb downstream 500 false Chr01: 20332939-20333438 Phaseolus vulgaris
Phvul.001G100200 1.0kb upstream 1.0kb upstream 3153 true Chr01: 20329786-20332938 Phaseolus vulgaris
Phvul.001G100200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 20329786-20330785 Phaseolus vulgaris
Phvul.001G100200 1.0kb downstream 1.0kb downstream 3153 true Chr01: 20330786-20333938 Phaseolus vulgaris
Phvul.001G100200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 20332939-20333938 Phaseolus vulgaris
Phvul.001G100200 2.0kb upstream 2.0kb upstream 4153 true Chr01: 20328786-20332938 Phaseolus vulgaris
Phvul.001G100200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 20328786-20330785 Phaseolus vulgaris
Phvul.001G100200 2.0kb downstream 2.0kb downstream 4153 true Chr01: 20330786-20334938 Phaseolus vulgaris
Phvul.001G100200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 20332939-20334938 Phaseolus vulgaris
Phvul.001G100200 5.0kb upstream 5.0kb upstream 7153 true Chr01: 20325786-20332938 Phaseolus vulgaris
Phvul.001G100200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 20325786-20330785 Phaseolus vulgaris
Phvul.001G100200 5.0kb downstream 5.0kb downstream 7153 true Chr01: 20330786-20337938 Phaseolus vulgaris
Phvul.001G100200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 20332939-20337938 Phaseolus vulgaris
Phvul.001G100200 10.0kb upstream 10.0kb upstream 12153 true Chr01: 20320786-20332938 Phaseolus vulgaris
Phvul.001G100200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 20320786-20330785 Phaseolus vulgaris
Phvul.001G100200 10.0kb downstream 10.0kb downstream 12153 true Chr01: 20330786-20342938 Phaseolus vulgaris
Phvul.001G100200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 20332939-20342938 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305562 5265 Fabidae View MSA
124061861 5270 Rosid View MSA
123627837 5271 Pentapetalae View MSA
122662184 5272 Eudicot View MSA
122049237 5273 Angiosperm View MSA
121349958 5274 Embryophyte View MSA
123381516 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 205.267 0.0 616.604 High High
cufflinks 49.7965 0.0 129.882 High  
cufflinks 12.8024 0.0 34.2778    
cufflinks 4.60963 0.0 13.6684    
cufflinks 7.66378 0.0 21.5691    
cufflinks 2.33161 0.0 7.45323   Low
cufflinks 6.00477 0.0 17.1724    
cufflinks 12.0248 0.0 32.2411    
cufflinks 2.38445 0.0 7.57894   Low
cufflinks 66.7706 0.0 176.971 High High
cufflinks 6.13804 0.0 17.6718    

0 Strain