Gene : Phvul.001G099500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR14025:SF21 - DEAD/DEAH BOX HELICASE-RELATED Genomic Order:  965
Name:  ? Phvul.001G099500 Secondary Identifier:  ? PAC:37168973
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G099500 0.5kb upstream 0.5kb upstream 30014 true Chr01: 19328812-19358825 Phaseolus vulgaris
Phvul.001G099500 0.5kb upstream 0.5kb upstream 500 false Chr01: 19358326-19358825 Phaseolus vulgaris
Phvul.001G099500 0.5kb downstream 0.5kb downstream 30014 true Chr01: 19328312-19358325 Phaseolus vulgaris
Phvul.001G099500 0.5kb downstream 0.5kb downstream 500 false Chr01: 19328312-19328811 Phaseolus vulgaris
Phvul.001G099500 1.0kb upstream 1.0kb upstream 30514 true Chr01: 19328812-19359325 Phaseolus vulgaris
Phvul.001G099500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 19358326-19359325 Phaseolus vulgaris
Phvul.001G099500 1.0kb downstream 1.0kb downstream 30514 true Chr01: 19327812-19358325 Phaseolus vulgaris
Phvul.001G099500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 19327812-19328811 Phaseolus vulgaris
Phvul.001G099500 2.0kb upstream 2.0kb upstream 31514 true Chr01: 19328812-19360325 Phaseolus vulgaris
Phvul.001G099500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 19358326-19360325 Phaseolus vulgaris
Phvul.001G099500 2.0kb downstream 2.0kb downstream 31514 true Chr01: 19326812-19358325 Phaseolus vulgaris
Phvul.001G099500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 19326812-19328811 Phaseolus vulgaris
Phvul.001G099500 5.0kb upstream 5.0kb upstream 34514 true Chr01: 19328812-19363325 Phaseolus vulgaris
Phvul.001G099500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 19358326-19363325 Phaseolus vulgaris
Phvul.001G099500 5.0kb downstream 5.0kb downstream 34514 true Chr01: 19323812-19358325 Phaseolus vulgaris
Phvul.001G099500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 19323812-19328811 Phaseolus vulgaris
Phvul.001G099500 10.0kb upstream 10.0kb upstream 39514 true Chr01: 19328812-19368325 Phaseolus vulgaris
Phvul.001G099500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 19358326-19368325 Phaseolus vulgaris
Phvul.001G099500 10.0kb downstream 10.0kb downstream 39514 true Chr01: 19318812-19358325 Phaseolus vulgaris
Phvul.001G099500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 19318812-19328811 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299787 5265 Fabidae View MSA
124064201 5270 Rosid View MSA
123751738 5271 Pentapetalae View MSA
122788297 5272 Eudicot View MSA
122045154 5273 Angiosperm View MSA
121349019 5274 Embryophyte View MSA
123425837 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.70984 0.0 17.1614    
cufflinks 3.63182 0.0 21.4807    
cufflinks 21.9704 0.0 110.146   High
cufflinks 1.6669 0.0 9.20029   Low
cufflinks 5.58341 0.0 30.7129    
cufflinks 11.4252 0.0 49.3172   High
cufflinks 2.42476 0.0 15.751    
cufflinks 2.79415 0.0 16.542    
cufflinks 1.6949 0.0 9.96336   Low
cufflinks 6.73018 0.0 34.9613    
cufflinks 2.68877 0.0 12.6385    

0 Strain