Gene : Phvul.001G099700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31677:SF5 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP Genomic Order:  967
Name:  ? Phvul.001G099700 Secondary Identifier:  ? PAC:37169153
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G099700 0.5kb upstream 0.5kb upstream 1196 true Chr01: 19568490-19569685 Phaseolus vulgaris
Phvul.001G099700 0.5kb upstream 0.5kb upstream 500 false Chr01: 19569186-19569685 Phaseolus vulgaris
Phvul.001G099700 0.5kb downstream 0.5kb downstream 1196 true Chr01: 19567990-19569185 Phaseolus vulgaris
Phvul.001G099700 0.5kb downstream 0.5kb downstream 500 false Chr01: 19567990-19568489 Phaseolus vulgaris
Phvul.001G099700 1.0kb upstream 1.0kb upstream 1696 true Chr01: 19568490-19570185 Phaseolus vulgaris
Phvul.001G099700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 19569186-19570185 Phaseolus vulgaris
Phvul.001G099700 1.0kb downstream 1.0kb downstream 1696 true Chr01: 19567490-19569185 Phaseolus vulgaris
Phvul.001G099700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 19567490-19568489 Phaseolus vulgaris
Phvul.001G099700 2.0kb upstream 2.0kb upstream 2696 true Chr01: 19568490-19571185 Phaseolus vulgaris
Phvul.001G099700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 19569186-19571185 Phaseolus vulgaris
Phvul.001G099700 2.0kb downstream 2.0kb downstream 2696 true Chr01: 19566490-19569185 Phaseolus vulgaris
Phvul.001G099700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 19566490-19568489 Phaseolus vulgaris
Phvul.001G099700 5.0kb upstream 5.0kb upstream 5696 true Chr01: 19568490-19574185 Phaseolus vulgaris
Phvul.001G099700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 19569186-19574185 Phaseolus vulgaris
Phvul.001G099700 5.0kb downstream 5.0kb downstream 5696 true Chr01: 19563490-19569185 Phaseolus vulgaris
Phvul.001G099700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 19563490-19568489 Phaseolus vulgaris
Phvul.001G099700 10.0kb upstream 10.0kb upstream 10696 true Chr01: 19568490-19579185 Phaseolus vulgaris
Phvul.001G099700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 19569186-19579185 Phaseolus vulgaris
Phvul.001G099700 10.0kb downstream 10.0kb downstream 10696 true Chr01: 19558490-19569185 Phaseolus vulgaris
Phvul.001G099700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 19558490-19568489 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253751 5265 Fabidae View MSA
124065469 5270 Rosid View MSA
123753503 5271 Pentapetalae View MSA
122795493 5272 Eudicot View MSA
122048706 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.112641 0.0 0.518475 Low Low
cufflinks 0.322466 0.0 1.34551 Low  
cufflinks 0.109322 0.0 0.510609 Low Low
cufflinks 0.71261 0.0 2.75438    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.78032 0.0 12.582    
cufflinks 3.19257 0.0 10.9892    
cufflinks 5.47002 0.0 17.4081   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain