Gene : Phvul.001G102901 P. vulgaris v2.1
Defline:  (1 of 3) K15559 - regulator of Ty1 transposition protein 103 (RTT103) Genomic Order:  995
Name:  ? Phvul.001G102901 Secondary Identifier:  ? PAC:37170357
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G102901 0.5kb upstream 0.5kb upstream 30831 true Chr01: 21067289-21098119 Phaseolus vulgaris
Phvul.001G102901 0.5kb upstream 0.5kb upstream 500 false Chr01: 21067289-21067788 Phaseolus vulgaris
Phvul.001G102901 0.5kb downstream 0.5kb downstream 30831 true Chr01: 21067789-21098619 Phaseolus vulgaris
Phvul.001G102901 0.5kb downstream 0.5kb downstream 500 false Chr01: 21098120-21098619 Phaseolus vulgaris
Phvul.001G102901 1.0kb upstream 1.0kb upstream 31331 true Chr01: 21066789-21098119 Phaseolus vulgaris
Phvul.001G102901 1.0kb upstream 1.0kb upstream 1000 false Chr01: 21066789-21067788 Phaseolus vulgaris
Phvul.001G102901 1.0kb downstream 1.0kb downstream 31331 true Chr01: 21067789-21099119 Phaseolus vulgaris
Phvul.001G102901 1.0kb downstream 1.0kb downstream 1000 false Chr01: 21098120-21099119 Phaseolus vulgaris
Phvul.001G102901 2.0kb upstream 2.0kb upstream 32331 true Chr01: 21065789-21098119 Phaseolus vulgaris
Phvul.001G102901 2.0kb upstream 2.0kb upstream 2000 false Chr01: 21065789-21067788 Phaseolus vulgaris
Phvul.001G102901 2.0kb downstream 2.0kb downstream 32331 true Chr01: 21067789-21100119 Phaseolus vulgaris
Phvul.001G102901 2.0kb downstream 2.0kb downstream 2000 false Chr01: 21098120-21100119 Phaseolus vulgaris
Phvul.001G102901 5.0kb upstream 5.0kb upstream 35331 true Chr01: 21062789-21098119 Phaseolus vulgaris
Phvul.001G102901 5.0kb upstream 5.0kb upstream 5000 false Chr01: 21062789-21067788 Phaseolus vulgaris
Phvul.001G102901 5.0kb downstream 5.0kb downstream 35331 true Chr01: 21067789-21103119 Phaseolus vulgaris
Phvul.001G102901 5.0kb downstream 5.0kb downstream 5000 false Chr01: 21098120-21103119 Phaseolus vulgaris
Phvul.001G102901 10.0kb upstream 10.0kb upstream 40331 true Chr01: 21057789-21098119 Phaseolus vulgaris
Phvul.001G102901 10.0kb upstream 10.0kb upstream 10000 false Chr01: 21057789-21067788 Phaseolus vulgaris
Phvul.001G102901 10.0kb downstream 10.0kb downstream 40331 true Chr01: 21067789-21108119 Phaseolus vulgaris
Phvul.001G102901 10.0kb downstream 10.0kb downstream 10000 false Chr01: 21098120-21108119 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302415 5265 Fabidae View MSA
124070749 5270 Rosid View MSA
123742286 5271 Pentapetalae View MSA
122795416 5272 Eudicot View MSA
122049571 5273 Angiosperm View MSA
123428880 5275 Viridiplantae View MSA
121348039 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.0535 0.0 85.934    
cufflinks 27.9404 0.0 99.4783    
cufflinks 22.6363 0.0 80.395    
cufflinks 15.7848 0.0 50.9186   Low
cufflinks 23.4978 0.0 74.6824    
cufflinks 24.5278 0.0 87.3552    
cufflinks 18.0379 0.0 57.5466    
cufflinks 16.4688 0.0 63.6382   Low
cufflinks 19.0783 0.0 61.1038    
cufflinks 36.4826 0.0 134.029 High High
cufflinks 23.8589 0.0 75.9294    

0 Strain