Gene : Phvul.001G103900 P. vulgaris v2.1
Defline:  (1 of 6) K02870 - large subunit ribosomal protein L12e (RP-L12e, RPL12) Genomic Order:  1051
Name:  ? Phvul.001G103900 Secondary Identifier:  ? PAC:37170627
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G103900 0.5kb upstream 0.5kb upstream 997 true Chr01: 26749787-26750783 Phaseolus vulgaris
Phvul.001G103900 0.5kb upstream 0.5kb upstream 500 false Chr01: 26749787-26750286 Phaseolus vulgaris
Phvul.001G103900 0.5kb downstream 0.5kb downstream 997 true Chr01: 26750287-26751283 Phaseolus vulgaris
Phvul.001G103900 0.5kb downstream 0.5kb downstream 500 false Chr01: 26750784-26751283 Phaseolus vulgaris
Phvul.001G103900 1.0kb upstream 1.0kb upstream 1497 true Chr01: 26749287-26750783 Phaseolus vulgaris
Phvul.001G103900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 26749287-26750286 Phaseolus vulgaris
Phvul.001G103900 1.0kb downstream 1.0kb downstream 1497 true Chr01: 26750287-26751783 Phaseolus vulgaris
Phvul.001G103900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 26750784-26751783 Phaseolus vulgaris
Phvul.001G103900 2.0kb upstream 2.0kb upstream 2497 true Chr01: 26748287-26750783 Phaseolus vulgaris
Phvul.001G103900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 26748287-26750286 Phaseolus vulgaris
Phvul.001G103900 2.0kb downstream 2.0kb downstream 2497 true Chr01: 26750287-26752783 Phaseolus vulgaris
Phvul.001G103900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 26750784-26752783 Phaseolus vulgaris
Phvul.001G103900 5.0kb upstream 5.0kb upstream 5497 true Chr01: 26745287-26750783 Phaseolus vulgaris
Phvul.001G103900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 26745287-26750286 Phaseolus vulgaris
Phvul.001G103900 5.0kb downstream 5.0kb downstream 5497 true Chr01: 26750287-26755783 Phaseolus vulgaris
Phvul.001G103900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 26750784-26755783 Phaseolus vulgaris
Phvul.001G103900 10.0kb upstream 10.0kb upstream 10497 true Chr01: 26740287-26750783 Phaseolus vulgaris
Phvul.001G103900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 26740287-26750286 Phaseolus vulgaris
Phvul.001G103900 10.0kb downstream 10.0kb downstream 10497 true Chr01: 26750287-26760783 Phaseolus vulgaris
Phvul.001G103900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 26750784-26760783 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031736 5273 Angiosperm View MSA
122250806 5265 Fabidae Singleton cluster - no MSA
124075572 5270 Rosid View MSA
123628911 5271 Pentapetalae View MSA
122797529 5272 Eudicot View MSA
121300731 5274 Embryophyte View MSA
123338458 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain