Gene : Phvul.001G104600 P. vulgaris v2.1
Defline:  (1 of 3) K13863 - solute carrier family 7 (cationic amino acid transporter), member 1 (SLC7A1, ATRC1) Genomic Order:  1045
Name:  ? Phvul.001G104600 Secondary Identifier:  ? PAC:37169809
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G104600 0.5kb upstream 0.5kb upstream 16535 true Chr01: 26496240-26512774 Phaseolus vulgaris
Phvul.001G104600 0.5kb upstream 0.5kb upstream 500 false Chr01: 26512275-26512774 Phaseolus vulgaris
Phvul.001G104600 0.5kb downstream 0.5kb downstream 16535 true Chr01: 26495740-26512274 Phaseolus vulgaris
Phvul.001G104600 0.5kb downstream 0.5kb downstream 500 false Chr01: 26495740-26496239 Phaseolus vulgaris
Phvul.001G104600 1.0kb upstream 1.0kb upstream 17035 true Chr01: 26496240-26513274 Phaseolus vulgaris
Phvul.001G104600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 26512275-26513274 Phaseolus vulgaris
Phvul.001G104600 1.0kb downstream 1.0kb downstream 17035 true Chr01: 26495240-26512274 Phaseolus vulgaris
Phvul.001G104600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 26495240-26496239 Phaseolus vulgaris
Phvul.001G104600 2.0kb upstream 2.0kb upstream 18035 true Chr01: 26496240-26514274 Phaseolus vulgaris
Phvul.001G104600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 26512275-26514274 Phaseolus vulgaris
Phvul.001G104600 2.0kb downstream 2.0kb downstream 18035 true Chr01: 26494240-26512274 Phaseolus vulgaris
Phvul.001G104600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 26494240-26496239 Phaseolus vulgaris
Phvul.001G104600 5.0kb upstream 5.0kb upstream 21035 true Chr01: 26496240-26517274 Phaseolus vulgaris
Phvul.001G104600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 26512275-26517274 Phaseolus vulgaris
Phvul.001G104600 5.0kb downstream 5.0kb downstream 21035 true Chr01: 26491240-26512274 Phaseolus vulgaris
Phvul.001G104600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 26491240-26496239 Phaseolus vulgaris
Phvul.001G104600 10.0kb upstream 10.0kb upstream 26035 true Chr01: 26496240-26522274 Phaseolus vulgaris
Phvul.001G104600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 26512275-26522274 Phaseolus vulgaris
Phvul.001G104600 10.0kb downstream 10.0kb downstream 26035 true Chr01: 26486240-26512274 Phaseolus vulgaris
Phvul.001G104600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 26486240-26496239 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304171 5265 Fabidae View MSA
124069554 5270 Rosid View MSA
123740707 5271 Pentapetalae View MSA
122796807 5272 Eudicot View MSA
122048985 5273 Angiosperm View MSA
121349992 5274 Embryophyte View MSA
123428616 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.4607 0.0 42.5872   High
cufflinks 9.1368 0.0 24.2156    
cufflinks 10.947 0.0 28.6774    
cufflinks 9.98497 0.0 26.4911    
cufflinks 10.8892 0.0 28.6361    
cufflinks 7.93633 0.0 21.2523    
cufflinks 6.86955 0.0 18.6622   Low
cufflinks 5.31574 0.0 14.6952   Low
cufflinks 8.94247 0.0 23.8598    
cufflinks 10.6017 0.0 27.834    
cufflinks 8.93018 0.0 23.7879    

0 Strain