Gene : Phvul.001G088800 P. vulgaris v2.1
Defline:  (1 of 4) PF09366 - Protein of unknown function (DUF1997) (DUF1997) Genomic Order:  864
Name:  ? Phvul.001G088800 Secondary Identifier:  ? PAC:37170150
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G088800 0.5kb upstream 0.5kb upstream 10205 true Chr01: 14069615-14079819 Phaseolus vulgaris
Phvul.001G088800 0.5kb upstream 0.5kb upstream 500 false Chr01: 14079320-14079819 Phaseolus vulgaris
Phvul.001G088800 0.5kb downstream 0.5kb downstream 10205 true Chr01: 14069115-14079319 Phaseolus vulgaris
Phvul.001G088800 0.5kb downstream 0.5kb downstream 500 false Chr01: 14069115-14069614 Phaseolus vulgaris
Phvul.001G088800 1.0kb upstream 1.0kb upstream 10705 true Chr01: 14069615-14080319 Phaseolus vulgaris
Phvul.001G088800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 14079320-14080319 Phaseolus vulgaris
Phvul.001G088800 1.0kb downstream 1.0kb downstream 10705 true Chr01: 14068615-14079319 Phaseolus vulgaris
Phvul.001G088800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 14068615-14069614 Phaseolus vulgaris
Phvul.001G088800 2.0kb upstream 2.0kb upstream 11705 true Chr01: 14069615-14081319 Phaseolus vulgaris
Phvul.001G088800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 14079320-14081319 Phaseolus vulgaris
Phvul.001G088800 2.0kb downstream 2.0kb downstream 11705 true Chr01: 14067615-14079319 Phaseolus vulgaris
Phvul.001G088800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 14067615-14069614 Phaseolus vulgaris
Phvul.001G088800 5.0kb upstream 5.0kb upstream 14705 true Chr01: 14069615-14084319 Phaseolus vulgaris
Phvul.001G088800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 14079320-14084319 Phaseolus vulgaris
Phvul.001G088800 5.0kb downstream 5.0kb downstream 14705 true Chr01: 14064615-14079319 Phaseolus vulgaris
Phvul.001G088800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 14064615-14069614 Phaseolus vulgaris
Phvul.001G088800 10.0kb upstream 10.0kb upstream 19705 true Chr01: 14069615-14089319 Phaseolus vulgaris
Phvul.001G088800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 14079320-14089319 Phaseolus vulgaris
Phvul.001G088800 10.0kb downstream 10.0kb downstream 19705 true Chr01: 14059615-14079319 Phaseolus vulgaris
Phvul.001G088800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 14059615-14069614 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299585 5265 Fabidae View MSA
124068915 5270 Rosid View MSA
123740182 5271 Pentapetalae View MSA
122791833 5272 Eudicot View MSA
122045233 5273 Angiosperm View MSA
121346827 5274 Embryophyte View MSA
123423879 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.51481 0.0 27.2368    
cufflinks 6.88334 0.0 25.6557    
cufflinks 17.1037 0.0 53.0428   High
cufflinks 8.11963 0.0 29.3879    
cufflinks 3.59866 0.0 12.6758    
cufflinks 9.14557 0.0 31.9217    
cufflinks 1.1838 0.0 5.18259   Low
cufflinks 1.46333 0.0 6.36228   Low
cufflinks 0.981688 0.0 4.40945   Low
cufflinks 5.42165 0.0 17.5382    
cufflinks 4.30219 0.0 14.7989    

0 Strain