Gene : Phvul.001G093300 P. vulgaris v2.1
Defline:  (1 of 2) K10808 - ribonucleoside-diphosphate reductase subunit M2 (RRM2) Genomic Order:  910
Name:  ? Phvul.001G093300 Secondary Identifier:  ? PAC:37170195
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6545 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7184 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7210 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7211 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7226 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7227 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7228 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7229 Phaseolus vulgaris pathologic  
Pvulgaris PWY-841 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G093300 0.5kb upstream 0.5kb upstream 1755 true Chr01: 17186445-17188199 Phaseolus vulgaris
Phvul.001G093300 0.5kb upstream 0.5kb upstream 500 false Chr01: 17187700-17188199 Phaseolus vulgaris
Phvul.001G093300 0.5kb downstream 0.5kb downstream 1755 true Chr01: 17185945-17187699 Phaseolus vulgaris
Phvul.001G093300 0.5kb downstream 0.5kb downstream 500 false Chr01: 17185945-17186444 Phaseolus vulgaris
Phvul.001G093300 1.0kb upstream 1.0kb upstream 2255 true Chr01: 17186445-17188699 Phaseolus vulgaris
Phvul.001G093300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 17187700-17188699 Phaseolus vulgaris
Phvul.001G093300 1.0kb downstream 1.0kb downstream 2255 true Chr01: 17185445-17187699 Phaseolus vulgaris
Phvul.001G093300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 17185445-17186444 Phaseolus vulgaris
Phvul.001G093300 2.0kb upstream 2.0kb upstream 3255 true Chr01: 17186445-17189699 Phaseolus vulgaris
Phvul.001G093300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 17187700-17189699 Phaseolus vulgaris
Phvul.001G093300 2.0kb downstream 2.0kb downstream 3255 true Chr01: 17184445-17187699 Phaseolus vulgaris
Phvul.001G093300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 17184445-17186444 Phaseolus vulgaris
Phvul.001G093300 5.0kb upstream 5.0kb upstream 6255 true Chr01: 17186445-17192699 Phaseolus vulgaris
Phvul.001G093300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 17187700-17192699 Phaseolus vulgaris
Phvul.001G093300 5.0kb downstream 5.0kb downstream 6255 true Chr01: 17181445-17187699 Phaseolus vulgaris
Phvul.001G093300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 17181445-17186444 Phaseolus vulgaris
Phvul.001G093300 10.0kb upstream 10.0kb upstream 11255 true Chr01: 17186445-17197699 Phaseolus vulgaris
Phvul.001G093300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 17187700-17197699 Phaseolus vulgaris
Phvul.001G093300 10.0kb downstream 10.0kb downstream 11255 true Chr01: 17176445-17187699 Phaseolus vulgaris
Phvul.001G093300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 17176445-17186444 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309353 5265 Fabidae View MSA
124067883 5270 Rosid View MSA
123737275 5271 Pentapetalae View MSA
122787137 5272 Eudicot View MSA
122041688 5273 Angiosperm View MSA
121344906 5274 Embryophyte View MSA
123428543 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.0018 0.0 85.3034 High  
cufflinks 70.3008 0.0 186.236 High High
cufflinks 36.6122 0.0 94.6357    
cufflinks 34.6623 0.0 89.6712 High  
cufflinks 43.3389 0.0 112.537 High  
cufflinks 36.392 0.0 94.0746 High  
cufflinks 24.3557 0.0 63.1376    
cufflinks 29.3258 0.0 75.9161 High  
cufflinks 32.9859 0.0 85.2645 High  
cufflinks 7.98128 0.0 22.4308   Low
cufflinks 46.1742 0.0 120.106 High  

0 Strain