Gene : Phvul.001G095300 P. vulgaris v2.1
Genomic Order:  924 Name:  ? Phvul.001G095300
Secondary Identifier:  ? PAC:37170241
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G095300 0.5kb upstream 0.5kb upstream 4229 true Chr01: 17761595-17765823 Phaseolus vulgaris
Phvul.001G095300 0.5kb upstream 0.5kb upstream 500 false Chr01: 17765324-17765823 Phaseolus vulgaris
Phvul.001G095300 0.5kb downstream 0.5kb downstream 4229 true Chr01: 17761095-17765323 Phaseolus vulgaris
Phvul.001G095300 0.5kb downstream 0.5kb downstream 500 false Chr01: 17761095-17761594 Phaseolus vulgaris
Phvul.001G095300 1.0kb upstream 1.0kb upstream 4729 true Chr01: 17761595-17766323 Phaseolus vulgaris
Phvul.001G095300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 17765324-17766323 Phaseolus vulgaris
Phvul.001G095300 1.0kb downstream 1.0kb downstream 4729 true Chr01: 17760595-17765323 Phaseolus vulgaris
Phvul.001G095300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 17760595-17761594 Phaseolus vulgaris
Phvul.001G095300 2.0kb upstream 2.0kb upstream 5729 true Chr01: 17761595-17767323 Phaseolus vulgaris
Phvul.001G095300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 17765324-17767323 Phaseolus vulgaris
Phvul.001G095300 2.0kb downstream 2.0kb downstream 5729 true Chr01: 17759595-17765323 Phaseolus vulgaris
Phvul.001G095300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 17759595-17761594 Phaseolus vulgaris
Phvul.001G095300 5.0kb upstream 5.0kb upstream 8729 true Chr01: 17761595-17770323 Phaseolus vulgaris
Phvul.001G095300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 17765324-17770323 Phaseolus vulgaris
Phvul.001G095300 5.0kb downstream 5.0kb downstream 8729 true Chr01: 17756595-17765323 Phaseolus vulgaris
Phvul.001G095300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 17756595-17761594 Phaseolus vulgaris
Phvul.001G095300 10.0kb upstream 10.0kb upstream 13729 true Chr01: 17761595-17775323 Phaseolus vulgaris
Phvul.001G095300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 17765324-17775323 Phaseolus vulgaris
Phvul.001G095300 10.0kb downstream 10.0kb downstream 13729 true Chr01: 17751595-17765323 Phaseolus vulgaris
Phvul.001G095300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 17751595-17761594 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310430 5265 Fabidae View MSA
124073179 5270 Rosid View MSA
123752262 5271 Pentapetalae View MSA
122794539 5272 Eudicot View MSA
122050080 5273 Angiosperm View MSA
121311726 5274 Embryophyte View MSA
123348985 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.4881 0.0 135.687 High  
cufflinks 24.6192 0.0 65.1879    
cufflinks 10.0585 0.0 28.6249   Low
cufflinks 27.2541 0.0 71.6148    
cufflinks 69.9255 0.0 181.47 High High
cufflinks 8.2128 0.0 23.9743   Low
cufflinks 25.7451 0.0 67.9995    
cufflinks 19.0296 0.0 51.3652    
cufflinks 27.4947 0.0 72.3493    
cufflinks 104.038 0.0 275.3 High High
cufflinks 57.9606 0.0 149.89 High  

0 Strain