Gene : Phvul.001G093500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR17490//PTHR17490:SF7 - SUA5 // SUBFAMILY NOT NAMED Genomic Order:  912
Name:  ? Phvul.001G093500 Secondary Identifier:  ? PAC:37170540
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G093500 0.5kb upstream 0.5kb upstream 23686 true Chr01: 17245658-17269343 Phaseolus vulgaris
Phvul.001G093500 0.5kb upstream 0.5kb upstream 500 false Chr01: 17268844-17269343 Phaseolus vulgaris
Phvul.001G093500 0.5kb downstream 0.5kb downstream 23686 true Chr01: 17245158-17268843 Phaseolus vulgaris
Phvul.001G093500 0.5kb downstream 0.5kb downstream 500 false Chr01: 17245158-17245657 Phaseolus vulgaris
Phvul.001G093500 1.0kb upstream 1.0kb upstream 24186 true Chr01: 17245658-17269843 Phaseolus vulgaris
Phvul.001G093500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 17268844-17269843 Phaseolus vulgaris
Phvul.001G093500 1.0kb downstream 1.0kb downstream 24186 true Chr01: 17244658-17268843 Phaseolus vulgaris
Phvul.001G093500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 17244658-17245657 Phaseolus vulgaris
Phvul.001G093500 2.0kb upstream 2.0kb upstream 25186 true Chr01: 17245658-17270843 Phaseolus vulgaris
Phvul.001G093500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 17268844-17270843 Phaseolus vulgaris
Phvul.001G093500 2.0kb downstream 2.0kb downstream 25186 true Chr01: 17243658-17268843 Phaseolus vulgaris
Phvul.001G093500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 17243658-17245657 Phaseolus vulgaris
Phvul.001G093500 5.0kb upstream 5.0kb upstream 28186 true Chr01: 17245658-17273843 Phaseolus vulgaris
Phvul.001G093500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 17268844-17273843 Phaseolus vulgaris
Phvul.001G093500 5.0kb downstream 5.0kb downstream 28186 true Chr01: 17240658-17268843 Phaseolus vulgaris
Phvul.001G093500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 17240658-17245657 Phaseolus vulgaris
Phvul.001G093500 10.0kb upstream 10.0kb upstream 33186 true Chr01: 17245658-17278843 Phaseolus vulgaris
Phvul.001G093500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 17268844-17278843 Phaseolus vulgaris
Phvul.001G093500 10.0kb downstream 10.0kb downstream 33186 true Chr01: 17235658-17268843 Phaseolus vulgaris
Phvul.001G093500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 17235658-17245657 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303771 5265 Fabidae View MSA
124060641 5270 Rosid View MSA
123737324 5271 Pentapetalae View MSA
122790315 5272 Eudicot View MSA
122043463 5273 Angiosperm View MSA
121345910 5274 Embryophyte View MSA
123425116 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.02731 0.0 25.486    
cufflinks 5.44952 0.0 16.2207    
cufflinks 20.0194 0.0 52.8079   High
cufflinks 3.82913 0.0 11.9271    
cufflinks 3.17811 0.0 10.1332    
cufflinks 7.15439 0.0 20.6522    
cufflinks 1.74236 0.0 5.90034   Low
cufflinks 3.10321 0.0 9.81638    
cufflinks 1.13798 0.0 4.03829   Low
cufflinks 5.41911 0.0 16.1675    
cufflinks 2.68562 0.0 8.71154    

0 Strain