Gene : Phvul.001G094700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11689:SF67 - CHLORIDE CHANNEL PROTEIN CLC-A-RELATED Genomic Order:  918
Name:  ? Phvul.001G094700 Secondary Identifier:  ? PAC:37168041
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G094700 0.5kb upstream 0.5kb upstream 5630 true Chr01: 17680316-17685945 Phaseolus vulgaris
Phvul.001G094700 0.5kb upstream 0.5kb upstream 500 false Chr01: 17680316-17680815 Phaseolus vulgaris
Phvul.001G094700 0.5kb downstream 0.5kb downstream 5630 true Chr01: 17680816-17686445 Phaseolus vulgaris
Phvul.001G094700 0.5kb downstream 0.5kb downstream 500 false Chr01: 17685946-17686445 Phaseolus vulgaris
Phvul.001G094700 1.0kb upstream 1.0kb upstream 6130 true Chr01: 17679816-17685945 Phaseolus vulgaris
Phvul.001G094700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 17679816-17680815 Phaseolus vulgaris
Phvul.001G094700 1.0kb downstream 1.0kb downstream 6130 true Chr01: 17680816-17686945 Phaseolus vulgaris
Phvul.001G094700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 17685946-17686945 Phaseolus vulgaris
Phvul.001G094700 2.0kb upstream 2.0kb upstream 7130 true Chr01: 17678816-17685945 Phaseolus vulgaris
Phvul.001G094700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 17678816-17680815 Phaseolus vulgaris
Phvul.001G094700 2.0kb downstream 2.0kb downstream 7130 true Chr01: 17680816-17687945 Phaseolus vulgaris
Phvul.001G094700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 17685946-17687945 Phaseolus vulgaris
Phvul.001G094700 5.0kb upstream 5.0kb upstream 10130 true Chr01: 17675816-17685945 Phaseolus vulgaris
Phvul.001G094700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 17675816-17680815 Phaseolus vulgaris
Phvul.001G094700 5.0kb downstream 5.0kb downstream 10130 true Chr01: 17680816-17690945 Phaseolus vulgaris
Phvul.001G094700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 17685946-17690945 Phaseolus vulgaris
Phvul.001G094700 10.0kb upstream 10.0kb upstream 15130 true Chr01: 17670816-17685945 Phaseolus vulgaris
Phvul.001G094700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 17670816-17680815 Phaseolus vulgaris
Phvul.001G094700 10.0kb downstream 10.0kb downstream 15130 true Chr01: 17680816-17695945 Phaseolus vulgaris
Phvul.001G094700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 17685946-17695945 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301169 5265 Fabidae View MSA
124064691 5270 Rosid View MSA
123741834 5271 Pentapetalae View MSA
122788464 5272 Eudicot View MSA
122042930 5273 Angiosperm View MSA
121310046 5274 Embryophyte View MSA
123428433 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.9179 0.0 87.0188    
cufflinks 14.7493 0.0 56.9132    
cufflinks 76.6814 0.0 344.172 High High
cufflinks 2.78369 0.0 15.7663   Low
cufflinks 26.05 0.0 92.537    
cufflinks 10.005 0.0 50.9523    
cufflinks 20.499 0.0 70.0214    
cufflinks 12.074 0.0 41.2762    
cufflinks 48.0633 0.0 171.435 High High
cufflinks 12.8014 0.0 49.9757    
cufflinks 4.06106 0.0 17.7334   Low

0 Strain